Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28362 | Canola | cytosol, nucleus, plastid | 24.55 | 31.34 |
| CDX92074 | Canola | cytosol | 71.12 | 30.31 |
| CDY43099 | Canola | cytosol | 71.48 | 29.25 |
| CDX75882 | Canola | cytosol | 24.91 | 24.13 |
| CDX82402 | Canola | cytosol, plasma membrane | 24.91 | 23.23 |
| CDY47824 | Canola | cytosol | 28.16 | 21.85 |
| CDX82401 | Canola | cytosol | 20.58 | 21.43 |
| CDY59365 | Canola | cytosol | 57.4 | 19.92 |
| CDY34134 | Canola | cytosol | 14.8 | 19.71 |
| CDY13177 | Canola | extracellular | 21.3 | 18.67 |
| CDY40959 | Canola | cytosol | 31.41 | 17.06 |
| CDY28360 | Canola | cytosol | 9.75 | 15.88 |
| CDY60590 | Canola | cytosol | 32.49 | 15.38 |
| CDY69096 | Canola | cytosol | 32.49 | 15.38 |
| CDY06999 | Canola | cytosol | 16.97 | 14.78 |
| CDY02548 | Canola | cytosol | 22.74 | 14.48 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 11.55 | 13.91 |
| CDX82115 | Canola | extracellular | 12.27 | 13.6 |
| CDY43910 | Canola | cytosol | 35.02 | 13.07 |
| CDY65744 | Canola | peroxisome | 13.0 | 12.68 |
| CDY20197 | Canola | cytosol | 9.39 | 12.62 |
| CDX77840 | Canola | cytosol | 3.97 | 11.58 |
| CDX87871 | Canola | cytosol | 37.55 | 11.32 |
| CDY22878 | Canola | cytosol | 38.99 | 11.0 |
| CDY46535 | Canola | cytosol | 15.16 | 10.91 |
| CDY22879 | Canola | cytosol | 16.97 | 10.85 |
| CDY06997 | Canola | cytosol | 17.33 | 10.71 |
| CDY53520 | Canola | cytosol | 11.19 | 10.58 |
| CDX93275 | Canola | cytosol | 16.97 | 10.49 |
| CDY53442 | Canola | cytosol | 14.8 | 10.38 |
| CDY07657 | Canola | cytosol | 16.97 | 10.35 |
| CDY45301 | Canola | cytosol | 10.83 | 10.24 |
| CDY24969 | Canola | cytosol | 16.61 | 10.13 |
| CDX93273 | Canola | cytosol | 16.61 | 10.09 |
| CDX74856 | Canola | cytosol | 16.61 | 10.0 |
| CDY07000 | Canola | cytosol | 14.44 | 9.05 |
| CDY20195 | Canola | cytosol | 13.72 | 8.96 |
| CDY38589 | Canola | cytosol | 14.44 | 8.73 |
| CDX90860 | Canola | cytosol | 11.55 | 8.29 |
| CDY59556 | Canola | cytosol | 12.27 | 7.61 |
| CDY32783 | Canola | cytosol | 14.08 | 7.46 |
| CDY47758 | Canola | cytosol | 13.72 | 7.16 |
| CDX82963 | Canola | cytosol | 10.11 | 6.68 |
| CDY70857 | Canola | cytosol | 10.11 | 6.68 |
| CDY63700 | Canola | cytosol | 13.36 | 6.32 |
| CDX96652 | Canola | extracellular | 13.72 | 6.18 |
| CDY47825 | Canola | cytosol | 15.52 | 5.42 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 9.75 | 4.8 |
| CDY51197 | Canola | cytosol | 14.8 | 4.57 |
| CDY51196 | Canola | cytosol | 14.8 | 4.41 |
| CDY02564 | Canola | cytosol | 14.8 | 4.38 |
| CDY51195 | Canola | cytosol, extracellular | 15.16 | 3.95 |
| CDY02563 | Canola | cytosol, extracellular | 14.8 | 3.87 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 4.33 | 3.32 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 2.17 | 2.87 |
| CDY21999 | Canola | extracellular | 1.08 | 1.73 |
| CDY68611 | Canola | cytosol | 1.08 | 1.13 |
| CDX79175 | Canola | cytosol | 1.08 | 0.99 |
| CDY70821 | Canola | cytosol | 0.36 | 0.22 |
| CDY54394 | Canola | cytosol | 0.0 | 0.0 |
| CDY45640 | Canola | cytosol | 0.0 | 0.0 |
| CDY06998 | Canola | cytosol | 0.0 | 0.0 |
| CDX93274 | Canola | cytosol | 0.0 | 0.0 |
| CDY72239 | Canola | cytosol | 0.0 | 0.0 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY43090 | EnsemblPlantsGene:GSBRNA2T00076053001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 |
| PFscan:PS51752 | ProteinID:CDY43090 | ProteinID:CDY43090.1 | SEG:seg | SMART:SM00915 | SUPFAM:SSF51101 |
| UniParc:UPI0004EF2F61 | UniProt:A0A078HX89 | MapMan:35.1 | : | : | : |
Description
BnaC05g36870DBnaC05g36870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HX89]
Coordinates
chrLK032545:+:40728..42946
Molecular Weight (calculated)
30202.3 Da
IEP (calculated)
9.123
GRAVY (calculated)
-0.546
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWDDGKHAK VKKVQITYDD VIYSIQFTLD PDEYITALSA YGKTLSTQEV ITALTFTTNK TTRGPYGKKS GFQISAPKAT GKQIAGFLGT CGSVLNSIDV
101: HYAPIPTGTG NSRSGTGSGA QKLEAQGGTG GTAWDDGSDH NGVTMIYVRN GGQGVQYVKF EYVKAGQPKQ GALHGGQGGR GSSQEIVINH PDEHLIFVEG
201: WYDSSNVILR IQFKTNQKTS EYIGYDFDGS GTKFTLQAQD KKIRVSRFCQ QPSQFHRSLF RSVILHHRPS YGSPEEA
101: HYAPIPTGTG NSRSGTGSGA QKLEAQGGTG GTAWDDGSDH NGVTMIYVRN GGQGVQYVKF EYVKAGQPKQ GALHGGQGGR GSSQEIVINH PDEHLIFVEG
201: WYDSSNVILR IQFKTNQKTS EYIGYDFDGS GTKFTLQAQD KKIRVSRFCQ QPSQFHRSLF RSVILHHRPS YGSPEEA
001: MSWDDGSHAK VKKVQLTFDE IIYSIQVTYD GATALQSQLR GSVGPKSAEF TLAPDEYITA LSAYGKSLST QEVITALTFT TNKTSYGPYG TKSGFQISAP
101: EATGKQISGF LGTSGNVLNT IDVHYSPIPT GGTGTGGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGGTG TGTGTGTGGT GTGTGTGGTG TGTGTGTGTG
201: TGTGTGTGTG TGGTGTGTGT GGTGTGTGTG TGTGTGTGGT GTGTGTGTGS GAQKLEAQGN STGGTSWDDG SDYDGVTKIY ASYGGEGIQY VKFDYVKGGV
301: TKQGVLHGKQ QSRQNPREFV INHPDEYLVS VEGWYETVML GIQFKTNLNT YEVSIYPFEP STDTKFTLQV QDKKIIGFHG FAGNHVNSIG AYFVPKSSTT
401: PVPSTPLKLT AEGGETGAVW DDGSHDDVKK VYVGQGQDGV AAVKFEYKNG SQVVFGDERG TRTLLGFEEF ELESDEYITS VEGYYEKNFG VDTVVTTLIF
501: KTSKNKTAGP FGIVSGTKFE FKKEGYKITG FHGRAGEYVN AIGAYLAPSG TTPLTPATQS QKLEGAGSEA GTLWDDGAFD GVRKVSVGQA QDGIGAVSFV
601: YDKAGQVVEG KEHGKPTLLG FEEFELDYPS EYITAVDGTY DAIFGNEPIV NMLRFTTNKR VSIPFGIGAG TAFEFKKDGQ KIVGFHGRAG DLLHKFGVHV
701: APITK
101: EATGKQISGF LGTSGNVLNT IDVHYSPIPT GGTGTGGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGGTG TGTGTGTGGT GTGTGTGGTG TGTGTGTGTG
201: TGTGTGTGTG TGGTGTGTGT GGTGTGTGTG TGTGTGTGGT GTGTGTGTGS GAQKLEAQGN STGGTSWDDG SDYDGVTKIY ASYGGEGIQY VKFDYVKGGV
301: TKQGVLHGKQ QSRQNPREFV INHPDEYLVS VEGWYETVML GIQFKTNLNT YEVSIYPFEP STDTKFTLQV QDKKIIGFHG FAGNHVNSIG AYFVPKSSTT
401: PVPSTPLKLT AEGGETGAVW DDGSHDDVKK VYVGQGQDGV AAVKFEYKNG SQVVFGDERG TRTLLGFEEF ELESDEYITS VEGYYEKNFG VDTVVTTLIF
501: KTSKNKTAGP FGIVSGTKFE FKKEGYKITG FHGRAGEYVN AIGAYLAPSG TTPLTPATQS QKLEGAGSEA GTLWDDGAFD GVRKVSVGQA QDGIGAVSFV
601: YDKAGQVVEG KEHGKPTLLG FEEFELDYPS EYITAVDGTY DAIFGNEPIV NMLRFTTNKR VSIPFGIGAG TAFEFKKDGQ KIVGFHGRAG DLLHKFGVHV
701: APITK
Arabidopsis Description
JAL34Jacalin-related lectin 34 [Source:UniProtKB/Swiss-Prot;Acc:O04310]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.