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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005053.1-P Field mustard cytosol 99.35 100.0
CDY24969 Canola cytosol 83.04 84.14
CDY07657 Canola cytosol 82.61 83.7
CDX93274 Canola cytosol 40.87 83.56
CDY06998 Canola cytosol 36.52 80.77
AT2G39310.4 Thale cress cytosol 79.13 79.48
CDY44637 Canola cytosol, mitochondrion, plastid 61.96 78.95
CDX93273 Canola cytosol 75.0 75.66
CDY06999 Canola cytosol 51.96 75.16
CDY07000 Canola cytosol 70.65 73.53
CDY38589 Canola cytosol 70.87 71.18
CDY06997 Canola cytosol 65.43 67.19
CDX93275 Canola cytosol 64.78 66.52
CDY54394 Canola cytosol 10.22 47.0
CDY20195 Canola cytosol 42.61 46.23
CDX82402 Canola cytosol, plasma membrane 29.57 45.79
CDY20197 Canola cytosol 20.22 45.15
CDX75881 Canola cytosol, extracellular, mitochondrion, plastid 20.0 44.02
CDX90860 Canola cytosol 36.74 43.78
CDY28362 Canola cytosol, nucleus, plastid 20.65 43.78
CDX82401 Canola cytosol 24.78 42.86
CDY59556 Canola cytosol 40.0 41.16
CDY02548 Canola cytosol 38.7 40.92
CDX77840 Canola cytosol 8.26 40.0
CDY53520 Canola cytosol 25.43 39.93
CDY45301 Canola cytosol 25.22 39.59
CDY21999 Canola extracellular 14.57 38.73
CDY65744 Canola peroxisome 23.7 38.38
CDY22879 Canola cytosol 35.65 37.88
CDY28360 Canola cytosol 13.91 37.65
CDY13177 Canola extracellular 24.78 36.08
CDX75882 Canola cytosol 22.39 36.01
CDY70857 Canola cytosol 32.61 35.8
CDX82963 Canola cytosol 32.39 35.56
CDY32783 Canola cytosol 39.78 34.99
CDY47758 Canola cytosol 39.78 34.46
CDY46535 Canola cytosol 28.7 34.29
CDY53442 Canola cytosol 29.13 33.92
CDY45640 Canola cytosol 22.61 33.88
CDX79175 Canola cytosol 22.17 33.55
CDY68611 Canola cytosol 18.48 32.08
CDY69096 Canola cytosol 39.57 31.11
CDY60590 Canola cytosol 39.35 30.94
CDY02565 Canola cytoskeleton, cytosol, plasma membrane 37.83 30.91
CDY40959 Canola cytosol 33.04 29.8
CDX92074 Canola cytosol 41.74 29.54
CDY72239 Canola cytosol 19.78 29.26
CDY43099 Canola cytosol 41.09 27.92
CDY43910 Canola cytosol 42.39 26.28
CDY70821 Canola cytosol 22.83 23.44
CDY63700 Canola cytosol 28.26 22.22
CDX96652 Canola extracellular 28.48 21.3
CDY51196 Canola cytosol 42.39 20.97
GSMUA_Achr10P... Banana cytosol, nucleus, plastid 6.74 20.81
CDY02564 Canola cytosol 42.17 20.73
CDY51197 Canola cytosol 40.43 20.71
CDY59365 Canola cytosol 35.43 20.43
CDX87871 Canola cytosol 37.17 18.61
CDY22878 Canola cytosol 39.13 18.33
CDY48032 Canola cytosol, extracellular, nucleus 9.13 18.26
CDY02563 Canola cytosol, extracellular 41.96 18.21
CDY51195 Canola cytosol, extracellular 41.74 18.05
CDY43090 Canola cytosol 10.0 16.61
CDX82115 Canola extracellular 8.91 16.4
CDY47825 Canola cytosol 27.61 16.02
CDY47824 Canola cytosol 11.3 14.57
CDY34134 Canola cytosol 2.83 6.25
Protein Annotations
Gene3D:2.100.10.30MapMan:35.1EnsemblPlants:CDX74856ProteinID:CDX74856ProteinID:CDX74856.1GO:GO:0003674
GO:GO:0005488GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00116845001InterPro:IPR001229InterPro:IPR036404InterPro:Jacalin-like_lectin_dom
InterPro:Jacalin-like_lectin_dom_plantInterPro:Jacalin-like_lectin_dom_sfPFAM:PF01419PFscan:PS51752PANTHER:PTHR23244PANTHER:PTHR23244:SF208
SMART:SM00915SUPFAM:SSF51101UniParc:UPI0004EEEFB5SEG:seg::
Description
BnaA05g06020D
Coordinates
chrLK031802:+:1053080..1055979
Molecular Weight (calculated)
50843.0 Da
IEP (calculated)
4.929
GRAVY (calculated)
-0.323
Length
460 amino acids
Sequence
(BLAST)
001: MAWMYRKLAT CGGEGGSEWD DDVYEGVRKV YVGQDLSRIT YIKFDYVKVD GEVVTREYGT ESQHPKEFEV QYPDEHIISV EGSYKKVGLY ATDVITSLVF
101: KTSKGRKSPM FGPNLLGLVT GTKFGFEDQG KKIVGFHGRS GDALDALGVY FVHDSLSTSL SPLYKLDAQG GTEGLVWDDG SYDAVKTLRI CQDDCRITYL
201: EFEYEKAGKS EIFQHGVKGG TPSEFVLDYP DEYIKTVEAT YDKPKLFQNT VITSLTFQTS KGRTSFFGYK VDKKFVLEQK DRRLVGFHGK EGDAIDALGA
301: YFAPIPAPTP LIPAKKLPSV GGNGGVTWDD GVYDDVKKIY VGQGNDGVSF VKFEYIKGTS LVTGDDHGKM TLLGAEEFVL EDGEYLTALV GYYDKIFGVE
401: EPVIISLQFK TNKRESSQFG MDSGEKFTFG ENGHKIVGFH GQASDVIHSV GVTVVPITTE
Best Arabidopsis Sequence Match ( AT2G39310.1 )
(BLAST)
001: MAKMYRKLAL CGGEGGQEWD DDVYEGVRKV YVGQDLNRIT YIKFEYVQED GEVVTTEYGT TNQHPKEFVI QYPDEHIIAV EGSYHQVALI ATEVITSLVF
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE
Arabidopsis Description
JAL22Jacalin-related lectin 22 [Source:UniProtKB/Swiss-Prot;Acc:O80950]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.