CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018941.1-P	Field mustard	cytosol	100.0	100.0
CDY65744	Canola	peroxisome	57.04	86.97
CDY32783	Canola	cytosol	58.66	48.57
CDY47758	Canola	cytosol	58.43	47.65
CDY45640	Canola	cytosol	30.25	42.67
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	54.73	42.1
CDY46535	Canola	cytosol	35.1	39.48
CDY20195	Canola	cytosol	38.34	39.15
CDY53442	Canola	cytosol	35.1	38.48
CDY07657	Canola	cytosol	37.88	36.12
CDY24969	Canola	cytosol	37.88	36.12
CDX82402	Canola	cytosol, plasma membrane	24.71	36.03
CDX74856	Canola	cytosol	37.88	35.65
CDY59556	Canola	cytosol	36.49	35.35
CDX90860	Canola	cytosol	31.41	35.23
CDY72239	Canola	cytosol	24.94	34.73
CDY20197	Canola	cytosol	16.4	34.47
CDY02548	Canola	cytosol	34.18	34.02
CDY06997	Canola	cytosol	34.87	33.71
CDY06999	Canola	cytosol	24.71	33.65
CDY38589	Canola	cytosol	35.1	33.19
CDX82401	Canola	cytosol	20.32	33.08
CDY28360	Canola	cytosol	12.93	32.94
CDX93274	Canola	cytosol	17.09	32.89
CDX93275	Canola	cytosol	33.95	32.81
CDX93273	Canola	cytosol	34.18	32.46
CDY28362	Canola	cytosol, nucleus, plastid	16.17	32.26
CDY53520	Canola	cytosol	21.71	32.08
CDY45301	Canola	cytosol	21.71	32.08
CDY54394	Canola	cytosol	7.39	32.0
CDY13177	Canola	extracellular	23.33	31.96
CDY06998	Canola	cytosol	15.24	31.73
CDY07000	Canola	cytosol	31.87	31.22
CDX77840	Canola	cytosol	6.7	30.53
CDY51196	Canola	cytosol	64.9	30.22
CDY02564	Canola	cytosol	64.2	29.7
CDY51197	Canola	cytosol	59.58	28.73
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	13.86	28.71
CDY44637	Canola	cytosol, mitochondrion, plastid	23.79	28.53
CDY70821	Canola	cytosol	29.33	28.35
CDX75882	Canola	cytosol	18.01	27.27
CDY21999	Canola	extracellular	10.39	26.01
CDY02563	Canola	cytosol, extracellular	62.82	25.66
CDY51195	Canola	cytosol, extracellular	62.59	25.47
CDX82963	Canola	cytosol	24.25	25.06
CDY60590	Canola	cytosol	33.72	24.96
CDY69096	Canola	cytosol	33.49	24.79
CDY40959	Canola	cytosol	28.87	24.51
CDY70857	Canola	cytosol	23.33	24.11
CDX87871	Canola	cytosol	49.19	23.18
CDY63700	Canola	cytosol	31.18	23.08
CDX92074	Canola	cytosol	34.41	22.92
CDY43099	Canola	cytosol	35.33	22.6
CDX96652	Canola	extracellular	31.41	22.11
CDY22878	Canola	cytosol	49.42	21.79
CDY68611	Canola	cytosol	13.16	21.51
CDX79175	Canola	cytosol	14.78	21.05
CDY48032	Canola	cytosol, extracellular, nucleus	11.09	20.87
CDY43910	Canola	cytosol	35.33	20.62
CDX82115	Canola	extracellular	11.09	19.2
CDY47825	Canola	cytosol	31.87	17.4
CDY43090	Canola	cytosol	10.85	16.97
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	5.54	16.11
CDY59365	Canola	cytosol	29.56	16.04
CDY47824	Canola	cytosol	11.55	14.01
CDY34134	Canola	cytosol	2.54	5.29

Protein Annotations

EnsemblPlants:CDY22879	EnsemblPlantsGene:GSBRNA2T00021239001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PFAM:PF01419
PFscan:PS51752	ProteinID:CDY22879	ProteinID:CDY22879.1	SEG:seg	SMART:SM00915	SUPFAM:SSF51101
UniParc:UPI000253E916	UniProt:A0A078GC10	MapMan:35.1	:	:	:

Description

BnaA06g01980DBnaA06g01980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GC10]

Coordinates

chrLK032136:-:637980..640855

Molecular Weight (calculated)

46696.7 Da

IEP (calculated)

4.877

GRAVY (calculated)

-0.328

Length

433 amino acids

Sequence
(BLAST)

001: MSKKVGAVGG YLGEAFDDGV FDGVKKIVVS VEGGLFNCIS MIKIEYEKDG KLESRQHGTI RGELKEFSVD YPNEYITSVG GSYDSVRYYE VPLIKSLIFK
101: TNTGRTSPIL GGTTESGQPA GTEFTLEGKY GEKLIGFFGR AGQALDAIGA NFGPLGGNKG NTFDDGFLDG VKTLTVGADE YSVTYIKIEY ENNGKDEVRE
201: HGTNRGELQE FSVNYPEDSI VAVGGTYNHI FNYDTTLITS LYFTTSKGFT SPLFGVAKGK EFELQGENGE KLRGIYGRAG TAIDAIGAHF GPLGGNKGNT
301: FDDGVFDGLK KITVGADEYS ITYIKIEYQK DAKVIVREHG TNRGELKEFT VNYPGDNIVA VGGSYNHIFN YDTTLITSLY FTTSKGFTSP LFGVAKGKDF
401: ELKGENGGKL LGIYGRDGTA IDAIGAHFET GSG

Best Arabidopsis Sequence Match ( AT1G52030.1 )
(BLAST)

001: MSEKVGAMGG NKGGAFDDGV FDGVKKVIVG KDFNNVTYIK VEYEKDGKFE IREHGTNRGQ LKEFSVDYPN EYITAVGGSY DTVFGYGSAL IKSLLFKTSY
101: GRTSPILGHT TLLGNPAGKE FMLESKYGGK LLGFHGRSGE ALDAIGPHFF AVNSSLKHFK PQGGNGGSAW DDGAFDGVRK VLVGRNGKFV SYVRFEYAKG
201: ERMVPHAHGK RQEAPQEFVV DYPNEHITSV EGTIDGYLSS LKFTTSKGRT SPVFGNVVGS KFVFEETSFK LVGFCGRSGE AIDALGAHFA PLPAPTPAPA
301: PAPAPAPAPA PSPAPASAPV PAPAPTPAPA PAPPNKVEAL GGNGGTIFDD GAFDHVRKVY IGQGDSGVAY VKFEYRKDGK RETREHGKMT VLGTEEFEVE
401: SDDYITSIEV SVDNVFGFKS EIVTSLVFKT FKGITSQPFG METEKKLELK DGKGGKLVGF HGKASDVLYA LGAYFAPTTN STTPSTPSTS KKLQARGGNG
501: GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DRHGKQTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV VTSLTFKTNK RTSQPFGMTA
601: GEHFELNEDG YKIVGFHGKA GDLVHQIGVH AVPIFTNYRC VF

Arabidopsis Description

F-ATMBPMyrosinase-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.