Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51196 | Canola | cytosol | 70.74 | 60.32 |
| CDY02564 | Canola | cytosol | 71.12 | 60.26 |
| CDY46535 | Canola | cytosol | 28.63 | 58.96 |
| CDY53442 | Canola | cytosol | 28.75 | 57.72 |
| CDY51197 | Canola | cytosol | 64.44 | 56.9 |
| CDY02563 | Canola | cytosol, extracellular | 69.99 | 52.36 |
| CDY51195 | Canola | cytosol, extracellular | 69.74 | 51.97 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 29.89 | 42.1 |
| CDY65744 | Canola | peroxisome | 13.62 | 38.03 |
| CDY32783 | Canola | cytosol | 23.58 | 35.76 |
| CDY06999 | Canola | cytosol | 14.12 | 35.22 |
| CDY20195 | Canola | cytosol | 18.79 | 35.14 |
| CDY47758 | Canola | cytosol | 23.46 | 35.03 |
| CDY22879 | Canola | cytosol | 17.4 | 31.87 |
| CDX93275 | Canola | cytosol | 16.65 | 29.46 |
| CDY06997 | Canola | cytosol | 16.27 | 28.79 |
| CDX93273 | Canola | cytosol | 16.52 | 28.73 |
| CDY24969 | Canola | cytosol | 16.02 | 27.97 |
| CDY07657 | Canola | cytosol | 16.02 | 27.97 |
| CDX74856 | Canola | cytosol | 16.02 | 27.61 |
| CDY07000 | Canola | cytosol | 14.88 | 26.7 |
| CDY70821 | Canola | cytosol | 14.63 | 25.89 |
| CDY38589 | Canola | cytosol | 14.88 | 25.76 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 11.73 | 25.76 |
| CDY20197 | Canola | cytosol | 6.68 | 25.73 |
| CDY70857 | Canola | cytosol | 13.49 | 25.54 |
| CDX82963 | Canola | cytosol | 13.37 | 25.3 |
| CDY02548 | Canola | cytosol | 13.62 | 24.83 |
| CDX90860 | Canola | cytosol | 11.85 | 24.35 |
| CDY59556 | Canola | cytosol | 13.11 | 23.27 |
| CDY28362 | Canola | cytosol, nucleus, plastid | 5.8 | 21.2 |
| CDY28360 | Canola | cytosol | 4.41 | 20.59 |
| CDY45640 | Canola | cytosol | 7.94 | 20.52 |
| CDY40959 | Canola | cytosol | 13.11 | 20.39 |
| CDY22878 | Canola | cytosol | 25.22 | 20.37 |
| CDY68611 | Canola | cytosol | 6.31 | 18.87 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 5.17 | 17.83 |
| CDY60590 | Canola | cytosol | 13.11 | 17.78 |
| CDY69096 | Canola | cytosol | 13.11 | 17.78 |
| CDX93274 | Canola | cytosol | 4.92 | 17.33 |
| CDX75882 | Canola | cytosol | 6.18 | 17.13 |
| CDX82401 | Canola | cytosol | 5.67 | 16.92 |
| CDX82402 | Canola | cytosol, plasma membrane | 6.31 | 16.84 |
| CDX92074 | Canola | cytosol | 13.75 | 16.77 |
| CDY13177 | Canola | extracellular | 6.56 | 16.46 |
| CDX79175 | Canola | cytosol | 6.31 | 16.45 |
| CDX82115 | Canola | extracellular | 5.17 | 16.4 |
| CDY43099 | Canola | cytosol | 13.75 | 16.1 |
| CDY06998 | Canola | cytosol | 4.16 | 15.87 |
| CDY43090 | Canola | cytosol | 5.42 | 15.52 |
| CDX87871 | Canola | cytosol | 17.91 | 15.45 |
| CDY63700 | Canola | cytosol | 11.22 | 15.21 |
| CDY43910 | Canola | cytosol | 14.12 | 15.09 |
| CDY72239 | Canola | cytosol | 5.8 | 14.79 |
| CDX96652 | Canola | extracellular | 11.22 | 14.47 |
| CDY47824 | Canola | cytosol | 6.18 | 13.73 |
| CDY45301 | Canola | cytosol | 5.04 | 13.65 |
| CDY53520 | Canola | cytosol | 4.92 | 13.31 |
| CDY59365 | Canola | cytosol | 13.24 | 13.16 |
| CDX77840 | Canola | cytosol | 1.51 | 12.63 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 1.26 | 6.71 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 1.64 | 6.22 |
| CDY34134 | Canola | cytosol | 1.26 | 4.81 |
| CDY21999 | Canola | extracellular | 1.01 | 4.62 |
| CDY54394 | Canola | cytosol | 0.5 | 4.0 |
Protein Annotations
| Gene3D:2.100.10.30 | Gene3D:2.120.10.80 | MapMan:9.5.2.2 | UniProt:A0A078IA98 | EnsemblPlants:CDY47825 | ProteinID:CDY47825 |
| ProteinID:CDY47825.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0030246 | EnsemblPlantsGene:GSBRNA2T00088288001 |
| InterPro:IPR001229 | InterPro:IPR015915 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf |
| InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | InterPro:Kelch_2 | PFAM:PF01344 | PFAM:PF01419 | PFAM:PF07646 |
| PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | SMART:SM00612 | SMART:SM00915 | SUPFAM:SSF117281 |
| SUPFAM:SSF51101 | UniParc:UPI0004EEC1C6 | SEG:seg | : | : | : |
Description
BnaC06g05180DBnaC06g05180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IA98]
Coordinates
chrLK032739:+:93032..99972
Molecular Weight (calculated)
86775.4 Da
IEP (calculated)
7.011
GRAVY (calculated)
-0.365
Length
793 amino acids
Sequence
(BLAST)
(BLAST)
001: MATMSEKLEA AGGDKGNPFD DGIFDGVKRI IVGKSLLSVS YIKIEYDKDG DTESKEHGQF TRKHKEFALD YPDEYITAVG GTHQFDIKHK TTLIRSLFFK
101: TSHGRTSDTL GHKKNPMIPS LVSSAISSAV APVVSYETDF MFESKNGGKL LGFHGRAGPL LNAIGPHFFA FNYPLTHFNL EGGNEGNAWD DGAFDGVRKV
201: VVGRRGKFVS YVRFEYAKGE RTVPHSHGER DEAPKEFVVG YPHEHITLVE GTIDGKLTSL KFTTSKGRTS PAFGNEDGSK FAFEKTGFKL VGFCGRSSNV
301: INALGAHFAP FPAPVPAPAP VPAPAPAPAP ASSPNKREAL GGKGTGETFD DGAYDNVRKV YVGQVDSNVA YLKFEYEKDG KREMREHGKK TGSGTEVFEV
401: RKDDYITSVK VYYGKHTGVI TSVTFKTFKG ITSPSFGKTS SNMFFLEGGK ITGFYGSSGD VIHSLGAYVF RSKRMLRGKW IQVKQIGKDL EPGPRCSHAI
501: AMVGDKMYSF GGELTPNFSI DKDMYVFDFN TRAWSIAPQN GDVPELACLG VCMVAIETTL YVFGGRDSNR DYNGFYSYDT VKSEWKLITP VDKGPTPRSF
601: FSMAADDENV YVFGGVSKTV RLNTLHAYNI VDQKWTELPN PGDSRVPRGG AGLAVVQGKI WVVYGFCGDE MDDVHCFDPV ESNWTKVETS GEKPWARSVF
701: ALAVVGKYII ISGGEIEMDP QAHLGPGKLD SGAFVLDTES LLWEKLEEGH SPRGWCASTT ASLDAKQGLL MYGGKSPTNG RYDDIFFYGV DSA
101: TSHGRTSDTL GHKKNPMIPS LVSSAISSAV APVVSYETDF MFESKNGGKL LGFHGRAGPL LNAIGPHFFA FNYPLTHFNL EGGNEGNAWD DGAFDGVRKV
201: VVGRRGKFVS YVRFEYAKGE RTVPHSHGER DEAPKEFVVG YPHEHITLVE GTIDGKLTSL KFTTSKGRTS PAFGNEDGSK FAFEKTGFKL VGFCGRSSNV
301: INALGAHFAP FPAPVPAPAP VPAPAPAPAP ASSPNKREAL GGKGTGETFD DGAYDNVRKV YVGQVDSNVA YLKFEYEKDG KREMREHGKK TGSGTEVFEV
401: RKDDYITSVK VYYGKHTGVI TSVTFKTFKG ITSPSFGKTS SNMFFLEGGK ITGFYGSSGD VIHSLGAYVF RSKRMLRGKW IQVKQIGKDL EPGPRCSHAI
501: AMVGDKMYSF GGELTPNFSI DKDMYVFDFN TRAWSIAPQN GDVPELACLG VCMVAIETTL YVFGGRDSNR DYNGFYSYDT VKSEWKLITP VDKGPTPRSF
601: FSMAADDENV YVFGGVSKTV RLNTLHAYNI VDQKWTELPN PGDSRVPRGG AGLAVVQGKI WVVYGFCGDE MDDVHCFDPV ESNWTKVETS GEKPWARSVF
701: ALAVVGKYII ISGGEIEMDP QAHLGPGKLD SGAFVLDTES LLWEKLEEGH SPRGWCASTT ASLDAKQGLL MYGGKSPTNG RYDDIFFYGV DSA
001: MVQKVEARGG EIGDVWDDGA YDGVRKVYVG QGEDGIAFVK FEYVNGSQEV VGDERGKKTL LGAEEFEVDP DDYIVYVEGY HEKVFGVTTK EIISTLTFKT
101: YKGKTSPPFG IVSGTKFVLQ GGKIVGFHGR STDVLHSLGA YISSPATPKL RGKWIKVEQK GEGPGPRCSH DIAQVGNKIF SFGGELTPNQ PIDKHLYVFD
201: LETRTWSISP ATGDVPNLSC LGVRMVSIGS SLYVFGGRDA SRKYNGFYSF DTTKNEWKLL TPVEQGPTPR SFHSMTADEN NVYVFGGVSA TVRLKTLDAY
301: NIVDHKWVQC STPGGSCSVR GGAGLEVVQG KVWVVYGFNG CEVDDVHCYD PAQDKWTQVE TFGEKPCARS VFASAVVGKH ILVFGGEIAM DPKAHEGPGQ
401: LSGGTFALDT ETLKWEKLDK LGEEEETPSI RGWSASTTGT IDGKKGLVMF GGKAQTNDRF GDLFFYGVDS A
101: YKGKTSPPFG IVSGTKFVLQ GGKIVGFHGR STDVLHSLGA YISSPATPKL RGKWIKVEQK GEGPGPRCSH DIAQVGNKIF SFGGELTPNQ PIDKHLYVFD
201: LETRTWSISP ATGDVPNLSC LGVRMVSIGS SLYVFGGRDA SRKYNGFYSF DTTKNEWKLL TPVEQGPTPR SFHSMTADEN NVYVFGGVSA TVRLKTLDAY
301: NIVDHKWVQC STPGGSCSVR GGAGLEVVQG KVWVVYGFNG CEVDDVHCYD PAQDKWTQVE TFGEKPCARS VFASAVVGKH ILVFGGEIAM DPKAHEGPGQ
401: LSGGTFALDT ETLKWEKLDK LGEEEETPSI RGWSASTTGT IDGKKGLVMF GGKAQTNDRF GDLFFYGVDS A
Arabidopsis Description
NSP2nitrile specifier protein 2 [Source:TAIR;Acc:AT2G33070]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.