Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017083.1-P | Field mustard | cytosol | 90.88 | 79.18 |
| CDX93273 | Canola | cytosol | 87.11 | 60.75 |
| CDY07000 | Canola | cytosol | 82.08 | 59.05 |
| CDX93275 | Canola | cytosol | 73.58 | 52.23 |
| CDX74856 | Canola | cytosol | 75.16 | 51.96 |
| CDY06997 | Canola | cytosol | 72.96 | 51.79 |
| CDY07657 | Canola | cytosol | 71.7 | 50.22 |
| CDY24969 | Canola | cytosol | 71.7 | 50.22 |
| AT2G39310.4 | Thale cress | cytosol | 72.33 | 50.22 |
| CDY38589 | Canola | cytosol | 62.26 | 43.23 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 47.48 | 41.83 |
| CDY46535 | Canola | cytosol | 37.11 | 30.65 |
| CDY53442 | Canola | cytosol | 37.42 | 30.13 |
| CDY65744 | Canola | peroxisome | 25.47 | 28.52 |
| CDY02548 | Canola | cytosol | 36.79 | 26.9 |
| CDY28362 | Canola | cytosol, nucleus, plastid | 17.61 | 25.81 |
| CDY20195 | Canola | cytosol | 33.33 | 25.0 |
| CDX90860 | Canola | cytosol | 30.19 | 24.87 |
| CDY22879 | Canola | cytosol | 33.65 | 24.71 |
| CDX93274 | Canola | cytosol | 16.67 | 23.56 |
| CDY32783 | Canola | cytosol | 37.74 | 22.94 |
| CDY47758 | Canola | cytosol | 37.42 | 22.41 |
| CDY20197 | Canola | cytosol | 14.15 | 21.84 |
| CDY28360 | Canola | cytosol | 11.64 | 21.76 |
| CDY70857 | Canola | cytosol | 28.3 | 21.48 |
| CDX82963 | Canola | cytosol | 27.99 | 21.24 |
| CDY40959 | Canola | cytosol | 33.96 | 21.18 |
| CDY59556 | Canola | cytosol | 29.25 | 20.81 |
| CDY13177 | Canola | extracellular | 19.81 | 19.94 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 35.22 | 19.89 |
| CDX77840 | Canola | cytosol | 5.66 | 18.95 |
| CDX75882 | Canola | cytosol | 16.98 | 18.88 |
| CDY69096 | Canola | cytosol | 34.28 | 18.63 |
| CDY60590 | Canola | cytosol | 34.28 | 18.63 |
| CDX82402 | Canola | cytosol, plasma membrane | 16.67 | 17.85 |
| CDY68611 | Canola | cytosol | 14.78 | 17.74 |
| CDX82401 | Canola | cytosol | 14.47 | 17.29 |
| CDX79175 | Canola | cytosol | 16.35 | 17.11 |
| CDY43090 | Canola | cytosol | 14.78 | 16.97 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 11.64 | 16.09 |
| CDY45640 | Canola | cytosol | 15.41 | 15.96 |
| CDY43910 | Canola | cytosol | 36.79 | 15.77 |
| CDX92074 | Canola | cytosol | 31.76 | 15.54 |
| CDY43099 | Canola | cytosol | 32.08 | 15.07 |
| CDX82115 | Canola | extracellular | 11.64 | 14.8 |
| CDY06998 | Canola | cytosol | 9.43 | 14.42 |
| CDY47825 | Canola | cytosol | 35.22 | 14.12 |
| CDY63700 | Canola | cytosol | 25.47 | 13.85 |
| CDY47824 | Canola | cytosol | 15.41 | 13.73 |
| CDY51197 | Canola | cytosol | 38.36 | 13.59 |
| CDY51196 | Canola | cytosol | 39.62 | 13.55 |
| CDY02564 | Canola | cytosol | 39.62 | 13.46 |
| CDY53520 | Canola | cytosol | 12.26 | 13.31 |
| CDX96652 | Canola | extracellular | 25.47 | 13.17 |
| CDY45301 | Canola | cytosol | 11.95 | 12.97 |
| CDY22878 | Canola | cytosol | 38.99 | 12.63 |
| CDX87871 | Canola | cytosol | 36.16 | 12.51 |
| CDY02563 | Canola | cytosol, extracellular | 39.94 | 11.98 |
| CDY59365 | Canola | cytosol | 29.56 | 11.78 |
| CDY51195 | Canola | cytosol, extracellular | 39.31 | 11.75 |
| CDY72239 | Canola | cytosol | 11.32 | 11.58 |
| CDY70821 | Canola | cytosol | 14.15 | 10.04 |
| CDY34134 | Canola | cytosol | 3.46 | 5.29 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 3.46 | 5.26 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 1.57 | 3.36 |
| CDY21999 | Canola | extracellular | 0.94 | 1.73 |
| CDY54394 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY06999 | EnsemblPlantsGene:GSBRNA2T00123311001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | PFAM:PF01419 | PFscan:PS51752 | ProteinID:CDY06999 | ProteinID:CDY06999.1 | SMART:SM00915 |
| SUPFAM:SSF51101 | UniParc:UPI0004EF0F86 | MapMan:35.1 | : | : | : |
Description
BnaA04g23160D
Coordinates
chrLK031974:-:608248..612790
Molecular Weight (calculated)
35995.6 Da
IEP (calculated)
5.298
GRAVY (calculated)
-0.397
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKMYQKLTL CGGEGGREWD DDVYEGIRKV YVGQDLSRIT YVKFEYVKED GEVVTREYGT ITQDPKEFII EYPDEHITAV EGSYNKVALI ATEVITSLVF
101: RTSKGRTSPT FGPNLFGVVN GTKFKFEDEG KKIVGFHGRS DNAIDALGVY LVLDSLTTPF PLYKLDAQGG TEGRVWDDGS FDGVRTLRIC QDDHRITYLE
201: FEYDKGGKSE KLYHGVKGGT PSELVVDYPN EYIKLVEVTY DKPNLFQNTV ITSLTFQTSS GRTSFFGYKV GKKFVLEQKD LRLVGFHGKE EVHYCSTVLY
301: CDSPRETRVG YNYLLVTI
101: RTSKGRTSPT FGPNLFGVVN GTKFKFEDEG KKIVGFHGRS DNAIDALGVY LVLDSLTTPF PLYKLDAQGG TEGRVWDDGS FDGVRTLRIC QDDHRITYLE
201: FEYDKGGKSE KLYHGVKGGT PSELVVDYPN EYIKLVEVTY DKPNLFQNTV ITSLTFQTSS GRTSFFGYKV GKKFVLEQKD LRLVGFHGKE EVHYCSTVLY
301: CDSPRETRVG YNYLLVTI
001: MAKMYRKLAL CGGEGGQEWD DDVYEGVRKV YVGQDLNRIT YIKFEYVQED GEVVTTEYGT TNQHPKEFVI QYPDEHIIAV EGSYHQVALI ATEVITSLVF
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE
Arabidopsis Description
JAL22Jacalin-related lectin 22 [Source:UniProtKB/Swiss-Prot;Acc:O80950]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.