CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022160.1-P	Field mustard	cytosol	99.54	95.99
CDY43099	Canola	cytosol	91.85	88.18
CDY43090	Canola	cytosol	30.31	71.12
CDX82402	Canola	cytosol, plasma membrane	28.46	62.29
CDY28362	Canola	cytosol, nucleus, plastid	19.69	58.99
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	18.77	58.37
CDX82401	Canola	cytosol	23.85	58.27
CDY54394	Canola	cytosol	7.54	49.0
CDX75882	Canola	cytosol	21.38	48.6
CDY20197	Canola	cytosol	15.38	48.54
CDX90860	Canola	cytosol	28.0	47.15
CDY06998	Canola	cytosol	14.62	45.67
CDX77840	Canola	cytosol	6.62	45.26
CDX93274	Canola	cytosol	15.54	44.89
CDY53520	Canola	cytosol	19.54	43.34
CDY45301	Canola	cytosol	19.38	43.0
CDY21999	Canola	extracellular	11.38	42.77
CDY07657	Canola	cytosol	29.69	42.51
CDY24969	Canola	cytosol	29.54	42.29
CDX74856	Canola	cytosol	29.54	41.74
CDY02548	Canola	cytosol	27.38	40.92
CDY59556	Canola	cytosol	28.0	40.72
CDY20195	Canola	cytosol	26.46	40.57
CDX93273	Canola	cytosol	27.85	39.69
CDY28360	Canola	cytosol	10.31	39.41
CDY13177	Canola	extracellular	18.92	38.92
CDY07000	Canola	cytosol	26.31	38.69
CDY60590	Canola	cytosol	34.77	38.63
CDY40959	Canola	cytosol	30.31	38.63
CDY59365	Canola	cytosol	47.23	38.47
CDY69096	Canola	cytosol	34.46	38.29
CDY38589	Canola	cytosol	26.46	37.55
CDY44637	Canola	cytosol, mitochondrion, plastid	20.62	37.12
CDY06997	Canola	cytosol	24.77	35.94
CDX93275	Canola	cytosol	24.77	35.94
CDY43910	Canola	cytosol	40.0	35.04
CDY22879	Canola	cytosol	22.92	34.41
CDY65744	Canola	peroxisome	14.62	33.45
CDX82963	Canola	cytosol	21.23	32.94
CDX79175	Canola	cytosol	15.38	32.89
CDY45640	Canola	cytosol	15.38	32.57
CDY68611	Canola	cytosol	13.23	32.45
CDY70857	Canola	cytosol	20.62	31.98
CDY06999	Canola	cytosol	15.54	31.76
CDY32783	Canola	cytosol	23.54	29.25
CDY47758	Canola	cytosol	23.54	28.81
CDY72239	Canola	cytosol	13.54	28.3
CDX87871	Canola	cytosol	39.38	27.86
CDY46535	Canola	cytosol	15.69	26.49
CDY22878	Canola	cytosol	38.31	25.36
CDY53442	Canola	cytosol	15.38	25.32
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	21.69	25.04
CDY47824	Canola	cytosol	13.08	23.81
CDY63700	Canola	cytosol	21.23	23.59
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	5.23	22.82
CDX96652	Canola	extracellular	21.54	22.76
CDY70821	Canola	cytosol	15.08	21.88
CDY48032	Canola	cytosol, extracellular, nucleus	7.54	21.3
CDX82115	Canola	extracellular	7.69	20.0
CDY34134	Canola	cytosol	6.31	19.71
CDY51197	Canola	cytosol	24.46	17.71
CDY51196	Canola	cytosol	25.23	17.63
CDY02564	Canola	cytosol	25.23	17.52
CDY51195	Canola	cytosol, extracellular	25.54	15.6
CDY02563	Canola	cytosol, extracellular	25.23	15.47
CDY47825	Canola	cytosol	16.77	13.75

Protein Annotations

EnsemblPlants:CDX92074	EnsemblPlantsGene:GSBRNA2T00153754001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	ProteinID:CDX92074	ProteinID:CDX92074.1	SEG:seg
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EE7CC3	MapMan:35.1	:	:

Description

BnaA05g23330D

Coordinates

chrLK031871:+:35212..39606

Molecular Weight (calculated)

67338.2 Da

IEP (calculated)

5.716

GRAVY (calculated)

-0.365

Length

650 amino acids

Sequence
(BLAST)

001: MSWDDGKHAK VNKVQITYDD VIYSIQVTYA GTALQSQRRG SVGPKTAEFT LGPDEYITAL SAYGKTLSTQ DVITSLTFTT NKGTYGPYGN KTGYQISAPE
101: GTGKQIAGFL GTSGNVLNSI DVHYAPIPTG TGGTGTGGTG TGETGTGGTG TGGTGTGGTG TGGTGGTGTG TGGTGTGTGG TGTGGTGTGG TGSGAEKLDA
201: QGGTGGTAWD DGSDHDGVTK ITVRTGGVGV QFVQFDYVKA GQPKQGALRG VQGSRGSTRE ILINHPDEYL VSVEGWYDSA NVILGIQFKT NQKTSDYLGY
301: EFDGSGKKFT LQVQGKKIIG FHGFASDHLN SIGAYFVPVS STPTTPTVPP KKLEAKGGAS GAVWDDGAHD NVKKVSVGQG QDGIAAVKFE YRNGSQVVIG
401: AERGTPTLLG YEEFELESDE YITIVEGTYD KILGSDGLTM LTFKTNKNRT YGPYGLEGST HFDLKEDGHK ITGFHGRAGD NSITAIGVYL APVGTIPLTP
501: ATQTKKLEAK GGDGGTLWDD GAFDGVRKVS VGQAQDGIGA VKFVYNNGSS EVIGDEHGKS TLLGFEEFEL NYPSEYITEV HGTFDKIFAS NSAIVTMLTF
601: KTNKPATYGP FGLTAGTPFD LKEDGHKIVG FHGSAGDLLH KFGVHVLPIN

Best Arabidopsis Sequence Match ( AT1G52040.1 )
(BLAST)

001: MSTGGPQKLE AQGGKEGKEW DDGAEHDGVT KIYVAAGGLG IEQIRFDYVK NGQPKEGSFH GVKGRSTIST IEISHPAEYL ISMEGWYDST NIIQGIQFKS
101: NKHTSQYFGY EFLGDGTQFS LQVNDNKIIS FHGFADSHLN SVGAYFAPIS SSLTTTPNKV EAQGGNGGET FDDGVFDHVR KVYVGQGESG VAYVKFEYEK
201: DGKRETRDHG KMTLLGTEEF EVDSDDYITS IEVSVDKVFG YNSEIVTALV FKTSKGTTSP PFGMVTEKKF ELKDGNGGKL AGFHGKASDV LYALGAYFAP
301: STTSTTPSTT KKLQARGGNG GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DGHGKKTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV
401: VTSLMFKTNK RTSQPFGMTA GEHFELKEDG YKVVGFHGKA GDLVHQIGVH IVPIFTNYRV AI

Arabidopsis Description

MBP1Myrosinase-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.