Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021177.1-P | Field mustard | nucleus | 98.16 | 71.48 |
| CDX75882 | Canola | cytosol | 82.95 | 62.94 |
| CDX82401 | Canola | cytosol | 75.58 | 61.65 |
| CDX82402 | Canola | cytosol, plasma membrane | 82.49 | 60.27 |
| AT3G16430.2 | Thale cress | cytosol | 74.19 | 54.39 |
| CDX77840 | Canola | cytosol | 17.97 | 41.05 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 32.72 | 33.97 |
| CDY20197 | Canola | cytosol | 31.34 | 33.01 |
| CDY53520 | Canola | cytosol | 35.02 | 25.94 |
| CDY13177 | Canola | extracellular | 37.33 | 25.63 |
| CDY45301 | Canola | cytosol | 34.56 | 25.6 |
| CDY43090 | Canola | cytosol | 31.34 | 24.55 |
| CDY02548 | Canola | cytosol | 44.7 | 22.3 |
| CDY28360 | Canola | cytosol | 16.59 | 21.18 |
| CDY07657 | Canola | cytosol | 44.24 | 21.15 |
| CDY24969 | Canola | cytosol | 43.78 | 20.93 |
| CDX74856 | Canola | cytosol | 43.78 | 20.65 |
| CDY06998 | Canola | cytosol | 18.89 | 19.71 |
| CDX92074 | Canola | cytosol | 58.99 | 19.69 |
| CDX90860 | Canola | cytosol | 35.02 | 19.69 |
| CDY07000 | Canola | cytosol | 38.71 | 19.0 |
| CDY20195 | Canola | cytosol | 36.87 | 18.87 |
| CDX93273 | Canola | cytosol | 39.63 | 18.86 |
| CDX93274 | Canola | cytosol | 19.35 | 18.67 |
| CDY43099 | Canola | cytosol | 58.06 | 18.61 |
| CDY38589 | Canola | cytosol | 38.71 | 18.34 |
| CDY06997 | Canola | cytosol | 37.79 | 18.3 |
| CDX93275 | Canola | cytosol | 37.33 | 18.08 |
| CDY06999 | Canola | cytosol | 25.81 | 17.61 |
| CDY59556 | Canola | cytosol | 35.94 | 17.45 |
| CDY60590 | Canola | cytosol | 45.16 | 16.75 |
| CDY69096 | Canola | cytosol | 45.16 | 16.75 |
| CDY65744 | Canola | peroxisome | 21.2 | 16.2 |
| CDY21999 | Canola | extracellular | 12.9 | 16.18 |
| CDY22879 | Canola | cytosol | 32.26 | 16.17 |
| CDY43910 | Canola | cytosol | 50.69 | 14.82 |
| CDY40959 | Canola | cytosol | 34.1 | 14.51 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 23.96 | 14.4 |
| CDY47824 | Canola | cytosol | 22.58 | 13.73 |
| CDY59365 | Canola | cytosol | 49.77 | 13.53 |
| CDX82963 | Canola | cytosol | 25.81 | 13.37 |
| CDY70857 | Canola | cytosol | 25.35 | 13.13 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 8.76 | 12.75 |
| CDY46535 | Canola | cytosol | 22.12 | 12.47 |
| CDY47758 | Canola | cytosol | 30.41 | 12.43 |
| CDY32783 | Canola | cytosol | 29.95 | 12.43 |
| CDY53442 | Canola | cytosol | 22.12 | 12.15 |
| CDY63700 | Canola | cytosol | 31.8 | 11.79 |
| CDX96652 | Canola | extracellular | 31.8 | 11.22 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 11.52 | 10.87 |
| CDX82115 | Canola | extracellular | 12.44 | 10.8 |
| CDX79175 | Canola | cytosol | 12.9 | 9.21 |
| CDY54394 | Canola | cytosol | 4.15 | 9.0 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 23.04 | 8.88 |
| CDX87871 | Canola | cytosol | 32.26 | 7.62 |
| CDY72239 | Canola | cytosol | 10.6 | 7.4 |
| CDY51196 | Canola | cytosol | 31.34 | 7.31 |
| CDY02564 | Canola | cytosol | 31.34 | 7.26 |
| CDY51197 | Canola | cytosol | 29.95 | 7.24 |
| CDY45640 | Canola | cytosol | 9.68 | 6.84 |
| CDY22878 | Canola | cytosol | 30.88 | 6.82 |
| CDY02563 | Canola | cytosol, extracellular | 32.72 | 6.7 |
| CDY51195 | Canola | cytosol, extracellular | 32.72 | 6.67 |
| CDY34134 | Canola | cytosol | 5.99 | 6.25 |
| CDY47825 | Canola | cytosol | 21.2 | 5.8 |
| CDY70821 | Canola | cytosol | 11.52 | 5.58 |
| CDY68611 | Canola | cytosol | 5.99 | 4.91 |
Protein Annotations
| EnsemblPlants:CDY28362 | EnsemblPlantsGene:GSBRNA2T00040159001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005507 |
| GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf |
| PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | PFAM:PF01419 | PFscan:PS51752 | ProteinID:CDY28362 | ProteinID:CDY28362.1 |
| SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI0004EE685A | UniProt:A0A078GTA4 | MapMan:35.1 | : |
Description
BnaC01g35320DBnaC01g35320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTA4]
Coordinates
chrLK032218:-:272876..273777
Molecular Weight (calculated)
23134.9 Da
IEP (calculated)
5.547
GRAVY (calculated)
-0.423
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKVEAQGG KGGNQWDDGS EHDAVAKIQV GAGGIGIQYV KFDYVKNGQT EEAPLRGIKG RSIPADPFVI NHPEEHLVSV EGWYNPEGLI QGLKFNSNKK
101: SSDVIGYNDG TSFTLQVQDK KIVGFHGFAG DYVHSLGAYF APLTSSTSLT PAKKLPALGS DEGTAWDDGA HHGVKKVYVG QGHDGVSAVK FEYVNGSEVV
201: VGDERGKPTL LGFEEVS
101: SSDVIGYNDG TSFTLQVQDK KIVGFHGFAG DYVHSLGAYF APLTSSTSLT PAKKLPALGS DEGTAWDDGA HHGVKKVYVG QGHDGVSAVK FEYVNGSEVV
201: VGDERGKPTL LGFEEVS
001: MAQKVEAKGG KGGNQWDDGS DHDAVTKIQV AVGGMGIQYI QFDYVKNGQT EQTPLRGIKG STIPTDPFVI NHPEEHLVSI EIWYKPDGLI QGLRFISNKK
101: TSRFIGYDRG TRSFLQVQDK KIIGFHGSAG DNLNSLGAYF APLTIPLTPA KPLPALGSDD GTAWDDGAYV GVKKVYVGQA QDGISAVKFV YDKSPEEVTG
201: EEHGKSTLLG FEEFVLDYPS EYIIAVEGTY DKIFGSDGSV ITMLRFKTNK QTSPPFGLEA GTAFELKEEG HKIVGFHGRA DALLHKIGVH VRPVSN
101: TSRFIGYDRG TRSFLQVQDK KIIGFHGSAG DNLNSLGAYF APLTIPLTPA KPLPALGSDD GTAWDDGAYV GVKKVYVGQA QDGISAVKFV YDKSPEEVTG
201: EEHGKSTLLG FEEFVLDYPS EYIIAVEGTY DKIFGSDGSV ITMLRFKTNK QTSPPFGLEA GTAFELKEEG HKIVGFHGRA DALLHKIGVH VRPVSN
Arabidopsis Description
PBP2PYK10-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O04313]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.