Factsheet for Bra021177.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28362	Canola	cytosol, nucleus, plastid	71.48	98.16
Bra001632.1-P	Field mustard	cytosol	70.81	86.48
Bra001631.1-P	Field mustard	cytosol	81.21	81.48
AT3G16430.2	Thale cress	cytosol	74.5	75.0
Bra021179.1-P	Field mustard	cytosol	77.52	51.11
Bra026177.1-P	Field mustard	cytosol	42.62	43.34
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	22.82	36.36
Bra022161.1-P	Field mustard	cytosol	45.97	30.44
Bra005053.1-P	Field mustard	cytosol	45.97	29.98
Bra000129.1-P	Field mustard	cytosol	45.64	29.96
Bra022160.1-P	Field mustard	cytosol	62.75	27.74
Bra021176.1-P	Field mustard	cytosol	42.95	27.41
Bra017082.1-P	Field mustard	cytosol	39.6	26.7
Bra027095.1-P	Field mustard	cytosol	50.67	25.68
Bra018942.1-P	Field mustard	cytosol	31.54	24.74
Bra023885.1-P	Field mustard	nucleus	42.95	23.7
Bra018941.1-P	Field mustard	cytosol	33.22	22.86
Bra030443.1-P	Field mustard	cytosol	55.37	22.24
Bra017083.1-P	Field mustard	cytosol	27.18	22.19
Bra013639.1-P	Field mustard	cytosol	34.56	21.41
Bra013637.1-P	Field mustard	cytosol	33.56	21.37
Bra017017.1-P	Field mustard	cytosol	22.48	19.59
Bra018945.1-P	Field mustard	cytosol	34.23	19.35
Bra016496.1-P	Field mustard	cytosol	31.21	15.95
Bra008068.1-P	Field mustard	cytosol	9.4	15.91
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	7.72	15.44
Bra025760.1-P	Field mustard	extracellular	29.19	14.33
Bra014308.1-P	Field mustard	cytosol	34.56	14.05
Bra014231.1-P	Field mustard	cytosol	46.64	13.28
Bra014309.1-P	Field mustard	cytosol	36.91	12.88
Bra014306.1-P	Field mustard	cytosol	16.11	11.71
Bra002818.1-P	Field mustard	cytosol	31.54	10.98
Bra014307.1-P	Field mustard	cytosol	26.51	9.03
Bra030402.1-P	Field mustard	cytosol	32.21	8.96
Bra018940.1-P	Field mustard	cytosol	31.88	8.06

Protein Annotations

EnsemblPlants:Bra021177.1	EnsemblPlants:Bra021177.1-P	EnsemblPlantsGene:Bra021177	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0005507	GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant
InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	SMART:SM00915
SUPFAM:SSF51101	UniParc:UPI0002543BC4	UniProt:M4DXD1	MapMan:35.1	:	:

Description

AT3G16420 (E=9e-131) PBP1 | PBP1 (PYK10-BINDING PROTEIN 1); copper ion binding

Coordinates

chrA01:-:23555407..23556763

Molecular Weight (calculated)

32050.6 Da

IEP (calculated)

6.083

GRAVY (calculated)

-0.351

Length

298 amino acids

Sequence
(BLAST)

001: MAQKVEAQGG KGGNQWDDGS EHDAVTKIQV GAGGIGIQYV KFDYVKNGQT EEAPLRGIKG RSIPADPFVI NHPEEHLVSV EGWYNPEGLI QGLKFNSNKK
101: SSDVIGYNDG TSFTLQVQDK KIVGFHGFAG DYVHSLGAYF APLTSSTSLT PAKKLPALGS DEGTAWDDGA HQGVKKVYVG QGHDGVSAVK FEYVNGSEVV
201: VGDERGKPTL LGFEEFELDY PSEYITVVHG TVDKIFGSGS AVITMLKFET NKRTSNPFGL EAGASFKVKE EGHKIVGFHG KANELLHQIG VHVLPITN

Best Arabidopsis Sequence Match ( AT3G16430.2 )
(BLAST)

001: MAQKVEAKGG KGGNQWDDGS DHDAVTKIQV AVGGMGIQYI QFDYVKNGQT EQTPLRGIKG STIPTDPFVI NHPEEHLVSI EIWYKPDGLI QGLRFISNKK
101: TSRFIGYDRG TRSFLQVQDK KIIGFHGSAG DNLNSLGAYF APLTIPLTPA KPLPALGSDD GTAWDDGAYV GVKKVYVGQA QDGISAVKFV YDKSPEEVTG
201: EEHGKSTLLG FEEFVLDYPS EYIIAVEGTY DKIFGSDGSV ITMLRFKTNK QTSPPFGLEA GTAFELKEEG HKIVGFHGRA DALLHKIGVH VRPVSN

Arabidopsis Description

PBP2PYK10-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O04313]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.