Factsheet for Bra021179.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021177.1-P	Field mustard	nucleus	51.11	77.52
Bra001631.1-P	Field mustard	cytosol	50.88	77.44
Bra001632.1-P	Field mustard	cytosol	38.72	71.72
Bra022160.1-P	Field mustard	cytosol	80.09	53.71
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	20.58	49.73
Bra026177.1-P	Field mustard	cytosol	26.99	41.64
Bra022161.1-P	Field mustard	cytosol	41.15	41.33
Bra005053.1-P	Field mustard	cytosol	41.59	41.14
Bra000129.1-P	Field mustard	cytosol	40.93	40.75
Bra017082.1-P	Field mustard	cytosol	37.83	38.69
Bra021176.1-P	Field mustard	cytosol	38.72	37.47
Bra017083.1-P	Field mustard	cytosol	28.76	35.62
Bra023885.1-P	Field mustard	nucleus	40.93	34.26
Bra018941.1-P	Field mustard	cytosol	32.74	34.18
Bra027095.1-P	Field mustard	cytosol	44.03	33.84
Bra018942.1-P	Field mustard	cytosol	27.88	33.16
Bra018945.1-P	Field mustard	cytosol	35.4	30.36
Bra013639.1-P	Field mustard	cytosol	32.3	30.35
Bra013637.1-P	Field mustard	cytosol	31.19	30.13
Bra008068.1-P	Field mustard	cytosol	11.5	29.55
Bra017017.1-P	Field mustard	cytosol	22.35	29.53
Bra030443.1-P	Field mustard	cytosol	47.35	28.84
Bra016496.1-P	Field mustard	cytosol	31.42	24.36
Bra014306.1-P	Field mustard	cytosol	21.24	23.41
Bra014308.1-P	Field mustard	cytosol	35.4	21.83
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	7.08	21.48
Bra025760.1-P	Field mustard	extracellular	27.88	20.76
Bra014309.1-P	Field mustard	cytosol	35.62	18.85
Bra014231.1-P	Field mustard	cytosol	41.15	17.77
Bra002818.1-P	Field mustard	cytosol	32.74	17.29
Bra014307.1-P	Field mustard	cytosol	28.98	14.97
Bra030402.1-P	Field mustard	cytosol	33.19	14.01
Bra018940.1-P	Field mustard	cytosol	32.3	12.38

Protein Annotations

EnsemblPlants:Bra021179.1	EnsemblPlants:Bra021179.1-P	EnsemblPlantsGene:Bra021179	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915
SUPFAM:SSF51101	UniParc:UPI0002543BC2	UniProt:M4DXD3	MapMan:35.1	:	:

Description

AT3G16460 (E=1e-153) | jacalin lectin family protein

Coordinates

chrA01:+:23534317..23536401

Molecular Weight (calculated)

48189.2 Da

IEP (calculated)

4.759

GRAVY (calculated)

-0.348

Length

452 amino acids

Sequence
(BLAST)

001: MAQKVEAQGG NGGNQWDDGS EHDAVTKIQT AAGGSGIQYV QFDYVKNGQT ETAPLRGIKG RAIAADPFVI NHPEEHLVSV EGWYDSSGII QGIKFNSNKK
101: SSDVIGYNDG TPFTLQVQDK KIIGFHGFAG DNLNSLGAYF APLIAAPPSV PPKKLEAKGG MSGAEWDDGA HDNVKKVSVG QGEDGVAAVK FEYTNGSQVV
201: IGAERGTPTL LGYEEFELES DEYITIVEGT YDKILGSDGL TMLTFKTNKN RTYGPYGLEG STHFDLKEEG YKITGFHGRA GATISAIGVY LAPVGTIPLT
301: PAQPTKKLEA KGGEGGTSWD DGAFDGVRKV SVGQAQDGIS AVKFVYNKGS SEIIGDEHGK STLLGFEEFE LDYPSEYITE VNGTFDRIFG SDSAVLTMLT
401: FKTNKPATYG PFGLTAGEAF DLKEEGHKIV GFHGSTGDLL HKFGVHVLPI TN

Best Arabidopsis Sequence Match ( AT3G16460.1 )
(BLAST)

001: MSWDDGSHAK VKKVQLTFDE IIYSIQVTYD GATALQSQLR GSVGPKSAEF TLAPDEYITA LSAYGKSLST QEVITALTFT TNKTSYGPYG TKSGFQISAP
101: EATGKQISGF LGTSGNVLNT IDVHYSPIPT GGTGTGGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGGTG TGTGTGTGGT GTGTGTGGTG TGTGTGTGTG
201: TGTGTGTGTG TGGTGTGTGT GGTGTGTGTG TGTGTGTGGT GTGTGTGTGS GAQKLEAQGN STGGTSWDDG SDYDGVTKIY ASYGGEGIQY VKFDYVKGGV
301: TKQGVLHGKQ QSRQNPREFV INHPDEYLVS VEGWYETVML GIQFKTNLNT YEVSIYPFEP STDTKFTLQV QDKKIIGFHG FAGNHVNSIG AYFVPKSSTT
401: PVPSTPLKLT AEGGETGAVW DDGSHDDVKK VYVGQGQDGV AAVKFEYKNG SQVVFGDERG TRTLLGFEEF ELESDEYITS VEGYYEKNFG VDTVVTTLIF
501: KTSKNKTAGP FGIVSGTKFE FKKEGYKITG FHGRAGEYVN AIGAYLAPSG TTPLTPATQS QKLEGAGSEA GTLWDDGAFD GVRKVSVGQA QDGIGAVSFV
601: YDKAGQVVEG KEHGKPTLLG FEEFELDYPS EYITAVDGTY DAIFGNEPIV NMLRFTTNKR VSIPFGIGAG TAFEFKKDGQ KIVGFHGRAG DLLHKFGVHV
701: APITK

Arabidopsis Description

JAL34Jacalin-related lectin 34 [Source:UniProtKB/Swiss-Prot;Acc:O04310]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.