Factsheet for Bra018945.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69096	Canola	cytosol	97.53	87.86
CDY60590	Canola	cytosol	97.34	87.69
AT1G52130.1	Thale cress	cytosol	50.66	55.28
AT1G60130.1	Thale cress	cytosol	56.93	50.0
AT1G60095.1	Thale cress	cytosol	56.93	49.92
AT5G49870.1	Thale cress	cytosol	55.6	48.75
AT5G49850.1	Thale cress	cytosol	54.84	48.49
Bra027095.1-P	Field mustard	cytosol	53.7	48.13
AT1G60110.2	Thale cress	cytosol	56.17	47.59
AT1G52110.1	Thale cress	mitochondrion	54.27	46.5
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	14.23	40.11
Bra017083.1-P	Field mustard	cytosol	26.0	37.53
Bra001631.1-P	Field mustard	cytosol	20.49	36.36
Bra021179.1-P	Field mustard	cytosol	30.36	35.4
Bra030443.1-P	Field mustard	cytosol	49.53	35.18
Bra021177.1-P	Field mustard	nucleus	19.35	34.23
Bra000129.1-P	Field mustard	cytosol	28.84	33.48
Bra005053.1-P	Field mustard	cytosol	28.84	33.26
AT5G49860.1	Thale cress	cytosol, plastid	13.28	31.67
Bra017082.1-P	Field mustard	cytosol	26.19	31.22
Bra021176.1-P	Field mustard	cytosol	26.95	30.41
Bra022161.1-P	Field mustard	cytosol	25.81	30.22
Bra001632.1-P	Field mustard	cytosol	13.66	29.51
Bra018941.1-P	Field mustard	cytosol	22.96	27.94
Bra018942.1-P	Field mustard	cytosol	20.11	27.89
Bra022160.1-P	Field mustard	cytosol	35.48	27.74
Bra008068.1-P	Field mustard	cytosol	8.73	26.14
Bra014306.1-P	Field mustard	cytosol	19.54	25.12
Bra017017.1-P	Field mustard	cytosol	16.13	24.85
Bra026177.1-P	Field mustard	cytosol	13.66	24.57
Bra023885.1-P	Field mustard	nucleus	24.86	24.26
Bra013639.1-P	Field mustard	cytosol	21.82	23.91
Bra013637.1-P	Field mustard	cytosol	21.06	23.72
Bra016496.1-P	Field mustard	cytosol	19.92	18.01
Bra014308.1-P	Field mustard	cytosol	24.29	17.46
Bra025760.1-P	Field mustard	extracellular	19.73	17.13
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	4.55	16.11
Bra014231.1-P	Field mustard	cytosol	31.88	16.05
Bra014309.1-P	Field mustard	cytosol	24.67	15.22
Bra014307.1-P	Field mustard	cytosol	25.24	15.2
Bra030402.1-P	Field mustard	cytosol	30.17	14.85
Bra018940.1-P	Field mustard	cytosol	32.26	14.42
Bra002818.1-P	Field mustard	cytosol	23.34	14.37

Protein Annotations

EnsemblPlants:Bra018945.1	EnsemblPlants:Bra018945.1-P	EnsemblPlantsGene:Bra018945	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	SMART:SM00915	SUPFAM:SSF51101
UniParc:UPI000253E912	UniProt:M4DR02	MapMan:35.1	:	:	:

Description

AT1G60130 (E=3e-159) | jacalin lectin family protein

Coordinates

chrA06:+:1068917..1070829

Molecular Weight (calculated)

59020.6 Da

IEP (calculated)

6.724

GRAVY (calculated)

-0.446

Length

527 amino acids

Sequence
(BLAST)

001: MTQRLEAEGS KNGRYIWDDG FNHDDVTKIY VRGGSDGIQF IRFDYIMKGQ LNNGSFHGES YKGFTQTFEI NHLKHEHLES VNGYYTESTG IQALQFKTNL
101: RISELMGYDE KGTKFTLAVH GKKIIGFHGS KQSNIYSLGA YFTWITPTRM EAKGGNGGKE WDDGSDHEGV TKIHVRGGRK GIQYIKFDYV KDGQPKDGPI
201: HGSISGGGFE PVFEIKHVDQ ECLVSVEGYY DVTSGVIQGL QFKTNFNTSQ LMGYNKGTKF IISENGMKII GFHGYVEKSL KSLGAYFTRL TPMKLECQGA
301: TSGGLLWDDG AFQGIRKVYA YYENNYIMFI SFDYENDGKA EKRDHGFKDG FTGQEGEFVI DYPNECLTSV EGTFSNESEA WITSLTFKTS KGRISQKFGN
401: ERFGDLGILL ESKGCALAGF HGRSDDSVLM AIGAYFYPMS SDANKLEAKG GDGGAFWDDG RFDGVRKIYI GISSNAICFV KFMYYKDARM FFGDDHGNKT
501: QLFGVKEVTD SILKATSYYL IKLIIIH

Best Arabidopsis Sequence Match ( AT1G60130.1 )
(BLAST)

001: MSQVFSNLFQ MTQRLEAQGQ KTLDSPFVWD DGSDHDDVTK IHVRGDSRGI NCIRFDYIKS GQRKYKSFYG PSWAGFTQTF KINHKEDEQL ESVEGFYKPD
101: SRTIVGLQFK TNLRISELIG HGKKDDTKFS LAVDGKKIIG FHGCSGSYLE SLGAYFTCIA PTRMEAKGAK GGTDWNDGAD HEGVAKIYVR GGRDCIQYIK
201: FDYVKDRKYI YGPAHGVRGR GFTESFEINH LDNEYMVSVE GYYDEGDSGI IQGIQFRTNI KTSELIGYNN GKKFSLAANG KKIIGFHGYA DQNLNSLGAY
301: FTTSPFIKLE SRESTGDLWD DGTFEGVRKV CIHKQPVLYS VIQFEYVNRG EVENRDLGLR VFIAEEGEFV VNYPYEFIIS VEGTFTNEKD PHVASLTFKT
401: SKGRTSSTFG TPGTKKFVLQ SKGCGVVGFH GVLSNDYISG LGAYFRLLPP LPDGEKVEAK GGDGGASWDD GGFDCIRKIY IGHGEMGIAF VKFLYDKDNK
501: FVVGDDHGSK TLLGVDEFEL EHPDEYLISV EGSYDVVDGS ESEVILMLRF KTNMRTSQVF GLDTTSSFIL EKECHKIVGF HGKIGKMLHQ IGVHVLPIID

Arabidopsis Description

JAL18Jacalin-related lectin 18 [Source:UniProtKB/Swiss-Prot;Acc:O80737]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.