Factsheet for Bra016496.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
peroxisome 2
extracellular 1
mitochondrion 2
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63700	Canola	cytosol	98.28	97.95
CDX96652	Canola	extracellular	98.28	93.17
Bra025760.1-P	Field mustard	extracellular	79.42	76.28
AT1G19715.3	Thale cress	cytoskeleton, cytosol, plastid	77.19	74.88
KRG98276	Soybean	cytosol	56.43	55.86
KRH30293	Soybean	cytosol	56.09	55.52
KRH72685	Soybean	peroxisome	50.6	53.93
VIT_18s0001g13210.t01	Wine grape	cytosol	55.75	48.51
PGSC0003DMT400021541	Potato	cytosol	52.83	47.09
KXG33492	Sorghum	cytosol	47.51	46.95
Solyc10g078600.1.1	Tomato	cytosol	52.32	46.85
Os01t0775500-01	Rice	cytosol, mitochondrion	27.27	45.56
Zm00001d038651_P004	Maize	cytosol, nucleus, plastid	46.48	45.47
OQU78268	Sorghum	cytosol, nucleus, plastid	46.31	45.45
Os05t0508400-01	Rice	cytoskeleton, cytosol, plastid	46.66	45.03
TraesCS1D01G327100.1	Wheat	cytosol	43.74	43.44
HORVU1Hr1G075520.2	Barley	cytosol	43.4	43.17
Bra008068.1-P	Field mustard	cytosol	12.86	42.61
TraesCS1A01G325500.1	Wheat	cytosol	43.4	42.52
HORVU3Hr1G075960.3	Barley	plastid	32.42	42.09
TraesCS1B01G338600.1	Wheat	cytosol	43.74	42.08
TraesCS3D01G310300.1	Wheat	plastid	32.25	41.69
TraesCS3A01G321000.1	Wheat	plastid	32.25	41.69
TraesCS3B01G344800.1	Wheat	plastid	32.08	41.46
OQU87644	Sorghum	cytosol	15.78	38.66
Bra001631.1-P	Field mustard	cytosol	16.81	33.0
Bra018942.1-P	Field mustard	cytosol	20.93	32.11
Bra001632.1-P	Field mustard	cytosol	13.21	31.56
Bra021179.1-P	Field mustard	cytosol	24.36	31.42
Bra018941.1-P	Field mustard	cytosol	23.33	31.41
Bra021177.1-P	Field mustard	nucleus	15.95	31.21
Bra021176.1-P	Field mustard	cytosol	23.16	28.91
Bra017083.1-P	Field mustard	cytosol	18.01	28.77
Bra005053.1-P	Field mustard	cytosol	22.47	28.67
Bra000129.1-P	Field mustard	cytosol	21.78	27.97
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	8.92	27.81
Bra017082.1-P	Field mustard	cytosol	20.75	27.38
Bra026177.1-P	Field mustard	cytosol	13.38	26.62
Bra022161.1-P	Field mustard	cytosol	20.07	26.0
Zm00001d012640_P010	Maize	endoplasmic reticulum	31.39	25.67
Bra013639.1-P	Field mustard	cytosol	18.35	22.25
Bra013637.1-P	Field mustard	cytosol	17.84	22.22
Bra014306.1-P	Field mustard	cytosol	15.61	22.2
Bra027095.1-P	Field mustard	cytosol	21.96	21.77
Bra023885.1-P	Field mustard	nucleus	19.9	21.48
Bra017017.1-P	Field mustard	cytosol	12.35	21.05
Bra022160.1-P	Field mustard	cytosol	23.84	20.62
Bra018945.1-P	Field mustard	cytosol	18.01	19.92
Bra030443.1-P	Field mustard	cytosol	24.87	19.54
Bra014308.1-P	Field mustard	cytosol	24.01	19.1
Bra014309.1-P	Field mustard	cytosol	23.84	16.28
Bra002818.1-P	Field mustard	cytosol	21.78	14.84
Bra014307.1-P	Field mustard	cytosol	20.07	13.37
Bra030402.1-P	Field mustard	cytosol	23.33	12.7
Bra014231.1-P	Field mustard	cytosol	22.47	12.51
Bra018940.1-P	Field mustard	cytosol	24.87	12.3
Os01t0775600-01	Rice	cytosol	0.86	2.31

Protein Annotations

EnsemblPlants:Bra016496.1	EnsemblPlants:Bra016496.1-P	EnsemblPlantsGene:Bra016496	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0002546D40
UniProt:M4DJ19	MapMan:35.1	:	:	:	:

Description

AT1G19715 (E=1e-253) | jacalin lectin family protein

Coordinates

chrA08:+:18755951..18758365

Molecular Weight (calculated)

63555.3 Da

IEP (calculated)

9.532

GRAVY (calculated)

-0.447

Length

583 amino acids

Sequence
(BLAST)

001: MNVQGKPASV GPWGGQSGHA WDDGTFTTVR QIVIAHGYSI DSIQIEYDKN GSSVWSDKRG GKGGIKFDKV KLDYPHEYLT SVKGTYSAFD VWGNLCVRSL
101: TFESNRKLYG PFGVESGTYF TLPKSDSMII GFYGKAGWYL DAIGAYLKPI PKETNPTSKM VLHSPQNVPH GVKKLEHSGN IHGSVGQKFD MVGLKQKDST
201: LSSHEGHVDA EITKHKLVTD TEKLQPKAGG GVKIHGPWGG IGGIMFDDGI YTGVRQINLS RSVGIVWMKV CYDFKGQAVW GSKHGGRGGF KHDKIVFDYP
301: SEVLTHITGT YGPLVYMGPN VIKSLTFHTN KGKHGPCGEE QGPSFTHKIG EGKVVGFHGR EGIFLDSIGV HVMPCKISPF KPSPHNATVP HNNTGVGANK
401: LVLAVNGHGE KFERGVVKEP TPNGFGPWGG NGGKPWDDGV FSGIKQIFVT RANDAISSLQ IEYDKNGQSV WSVEHGGHSG VATHRIILEY PNETLTCISG
501: YYGPLNNSDK SLVVKSLSFY TSRGKYGPYG EETGTFFTST KTEGKVLGLH GRSSSYLDAV GVHMQQRLDN KTQFNRTSCF KRY

Best Arabidopsis Sequence Match ( AT1G19715.1 )
(BLAST)

001: MSVEGKPASL GPWGGQSGHA WDDGMYTTVK QIIIAHGSGI DSIQIEYDKN GSSVWSEKRG GKGGKKFDKV KFDYPHEYLI SVNGTYGSFD VWGTICVRSL
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF

Arabidopsis Description

JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.