Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G327100.1 | Wheat | cytosol | 94.39 | 97.44 |
| TraesCS1A01G325500.1 | Wheat | cytosol | 94.39 | 96.13 |
| HORVU1Hr1G075520.2 | Barley | cytosol | 91.75 | 94.88 |
| Zm00001d038651_P004 | Maize | cytosol, nucleus, plastid | 73.43 | 74.66 |
| OQU78268 | Sorghum | cytosol, nucleus, plastid | 73.1 | 74.58 |
| Os05t0508400-01 | Rice | cytoskeleton, cytosol, plastid | 74.26 | 74.5 |
| TraesCS3B01G344800.1 | Wheat | plastid | 40.59 | 54.55 |
| KRG98276 | Soybean | cytosol | 46.86 | 48.22 |
| KRH30293 | Soybean | cytosol | 46.37 | 47.71 |
| KRH72685 | Soybean | peroxisome | 40.43 | 44.79 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 44.39 | 44.76 |
| Bra016496.1-P | Field mustard | cytosol | 42.08 | 43.74 |
| Bra025760.1-P | Field mustard | extracellular | 43.73 | 43.66 |
| CDY63700 | Canola | cytosol | 41.75 | 43.25 |
| VIT_18s0001g13210.t01 | Wine grape | cytosol | 47.69 | 43.13 |
| PGSC0003DMT400021541 | Potato | cytosol | 44.88 | 41.59 |
| CDX96652 | Canola | extracellular | 42.08 | 41.46 |
| Solyc10g078600.1.1 | Tomato | cytosol | 44.39 | 41.32 |
| TraesCS6B01G135000.1 | Wheat | cytosol | 9.24 | 38.36 |
| TraesCS3B01G032600.1 | Wheat | cytosol | 9.24 | 37.84 |
| TraesCS3B01G052500.1 | Wheat | cytosol | 7.92 | 34.04 |
| TraesCS7B01G152700.1 | Wheat | cytosol | 8.58 | 33.55 |
| TraesCS1B01G380700.1 | Wheat | mitochondrion | 11.22 | 30.91 |
| TraesCS3B01G031800.1 | Wheat | cytosol, plastid | 8.91 | 22.31 |
| TraesCS3B01G053100.1 | Wheat | cytosol, plastid | 6.93 | 21.54 |
| TraesCS3B01G165200.1 | Wheat | cytosol | 8.09 | 16.9 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G338600.1 | EnsemblPlantsGene:TraesCS1B01G338600 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 |
| PFscan:PS51752 | SEG:seg | SMART:SM00915 | SUPFAM:SSF51101 | TIGR:cd09612 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1B:+:566605390..566608469
Molecular Weight (calculated)
65275.2 Da
IEP (calculated)
7.990
GRAVY (calculated)
-0.404
Length
606 amino acids
Sequence
(BLAST)
(BLAST)
001: MINMCSLAKG STGNPAKSIM SAANGKSPIV VGPWGGTGGC PWDDGVYSTV CQIMITHGAA VDSIRIQYDL KGQSVWSQTH GSTEDGSETD KVKLDVPGEI
101: LLSVSGYYGS VCGSPVIIRS LTFQSNRSKY GPFGTEDGTP FSLPVSSGKI IGFHGRSGSY LNSIGFYLKQ VHVPIPSPPS YPASPQLPTA AYSRNGYTVT
201: EVDDEHDMAL AVSNRADSYA VYGTGYPKQQ YAHPSPDYHD GSIMNKMVSY PSSYRAAVSG PETHGPWGGS GGTIFDDGVY TGVWQINLTR AVGVTSMKVL
301: YDRHGQAVWG NKHGFSSGVP PDKIAFDFPS EVLTHITGYY GPTIIMGPTA VRSLTFHTNR RRYGPYGDEY GTYFSTSFAD GRVVGFHGRE GWYIDGIGVH
401: VQRGKVPSSL RRAASRSPSP APRSDYDPSD VDEEVPYAAM VKEPAAAGPG PWGGPGGRAW DDGVYAGVNQ VYVTRGALIG SIQIQYDRGD RSEWSARHGT
501: SGHITHRVKL DAPHEVLTCV RGYYNADPAE GPRALRSITF VSNRGRYGPF GDEVGTYFSS PATAEGKVVG FHGRSGQHLD AIGVHMQHWQ GDRRAAPKYV
601: LSKYLF
101: LLSVSGYYGS VCGSPVIIRS LTFQSNRSKY GPFGTEDGTP FSLPVSSGKI IGFHGRSGSY LNSIGFYLKQ VHVPIPSPPS YPASPQLPTA AYSRNGYTVT
201: EVDDEHDMAL AVSNRADSYA VYGTGYPKQQ YAHPSPDYHD GSIMNKMVSY PSSYRAAVSG PETHGPWGGS GGTIFDDGVY TGVWQINLTR AVGVTSMKVL
301: YDRHGQAVWG NKHGFSSGVP PDKIAFDFPS EVLTHITGYY GPTIIMGPTA VRSLTFHTNR RRYGPYGDEY GTYFSTSFAD GRVVGFHGRE GWYIDGIGVH
401: VQRGKVPSSL RRAASRSPSP APRSDYDPSD VDEEVPYAAM VKEPAAAGPG PWGGPGGRAW DDGVYAGVNQ VYVTRGALIG SIQIQYDRGD RSEWSARHGT
501: SGHITHRVKL DAPHEVLTCV RGYYNADPAE GPRALRSITF VSNRGRYGPF GDEVGTYFSS PATAEGKVVG FHGRSGQHLD AIGVHMQHWQ GDRRAAPKYV
601: LSKYLF
001: MVLTSSYSVE GKPASLGPWG GQSGHAWDDG MYTTVKQIII AHGSGIDSIQ IEYDKNGSSV WSEKRGGKGG KKFDKVKFDY PHEYLISVNG TYGSFDVWGT
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F
Arabidopsis Description
JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [plastid,cytoskeleton,cytosol]
SUBAcon: [plastid,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.