Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G325500.1 | Wheat | cytosol | 97.1 | 95.8 |
| HORVU1Hr1G075520.2 | Barley | cytosol | 95.57 | 95.73 |
| TraesCS1B01G338600.1 | Wheat | cytosol | 97.44 | 94.39 |
| OQU78268 | Sorghum | cytosol, nucleus, plastid | 76.15 | 75.25 |
| Zm00001d038651_P004 | Maize | cytosol, nucleus, plastid | 76.15 | 75.0 |
| Os05t0508400-01 | Rice | cytoskeleton, cytosol, plastid | 77.17 | 75.0 |
| TraesCS3D01G310300.1 | Wheat | plastid | 41.57 | 54.1 |
| KRG98276 | Soybean | cytosol | 48.55 | 48.39 |
| KRH30293 | Soybean | cytosol | 48.04 | 47.88 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 46.17 | 45.09 |
| KRH72685 | Soybean | peroxisome | 41.74 | 44.79 |
| Bra025760.1-P | Field mustard | extracellular | 45.32 | 43.82 |
| Bra016496.1-P | Field mustard | cytosol | 43.44 | 43.74 |
| VIT_18s0001g13210.t01 | Wine grape | cytosol | 49.4 | 43.28 |
| CDY63700 | Canola | cytosol | 43.1 | 43.25 |
| PGSC0003DMT400021541 | Potato | cytosol | 46.51 | 41.74 |
| Solyc10g078600.1.1 | Tomato | cytosol | 46.0 | 41.47 |
| CDX96652 | Canola | extracellular | 43.44 | 41.46 |
| TraesCS7D01G254500.1 | Wheat | cytosol | 9.37 | 35.48 |
| TraesCS3D01G028700.1 | Wheat | cytosol | 8.35 | 34.75 |
| TraesCS1D01G368600.1 | Wheat | mitochondrion | 12.1 | 32.27 |
| TraesCS3D01G030000.1 | Wheat | cytosol | 9.03 | 31.93 |
| TraesCS3D01G029200.1 | Wheat | cytosol | 8.35 | 20.85 |
| TraesCS1D01G367900.1 | Wheat | cytosol | 8.86 | 16.25 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G327100.1 | EnsemblPlantsGene:TraesCS1D01G327100 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 |
| PFscan:PS51752 | SEG:seg | SMART:SM00915 | SUPFAM:SSF51101 | TIGR:cd09612 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1D:+:419467437..419470006
Molecular Weight (calculated)
63386.9 Da
IEP (calculated)
7.439
GRAVY (calculated)
-0.431
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MSANGKSPIV VGPWGGTGGY PWDDGVYSTV CQIMITHGAA VDSIRIQYDL KGHSVWSQTH GSTEDGSETD KVKLDVPGEI LLSVSGYYGS VCGSPVIIRS
101: LTFQSNRSKY GPFGTEDGTP FSLPVSSGKI IGFHGRSGSY LNSIGFYLKQ VHVPIPSPPS YPASPQLPTS AYSRNGYTVT EVDDEHDMAL AVRDRADGYA
201: VYGAGYPKQQ YAHPSPDYHD GSIMNKMVSY PSSYRAAAMS GPETHGPWGG SGGTIFDDGV YTGVWQINLT RAVGVTSMKV LYDRHGQAVW GNKHGFSSGV
301: PPDKIAFDFP SEVLTHITGY YGPTIIMGPT AVRSLTFHTN RRRYGPYGDE YGTYFSTSFA DGRVVGFHGR EGWYIDGIGV HVQQGKVPRS LRAAASRSPS
401: PAPRSDPDPS DVDEEVPYAA MVKEPAAAGP GPWGGPGGRA WDDGVYAGVN QVYVTRGALI GSIQIQYDRG DRSEWSARHG TSGHITHRVK LDAPHEVLTC
501: VRGYYNADPA EGPRALRSIT FVSNRGRYGP FGDEVGTYFS SPATAEGKVV GFHGRSGQHL DAIGVHMQHW QGDRRAAPKY VLSKYLF
101: LTFQSNRSKY GPFGTEDGTP FSLPVSSGKI IGFHGRSGSY LNSIGFYLKQ VHVPIPSPPS YPASPQLPTS AYSRNGYTVT EVDDEHDMAL AVRDRADGYA
201: VYGAGYPKQQ YAHPSPDYHD GSIMNKMVSY PSSYRAAAMS GPETHGPWGG SGGTIFDDGV YTGVWQINLT RAVGVTSMKV LYDRHGQAVW GNKHGFSSGV
301: PPDKIAFDFP SEVLTHITGY YGPTIIMGPT AVRSLTFHTN RRRYGPYGDE YGTYFSTSFA DGRVVGFHGR EGWYIDGIGV HVQQGKVPRS LRAAASRSPS
401: PAPRSDPDPS DVDEEVPYAA MVKEPAAAGP GPWGGPGGRA WDDGVYAGVN QVYVTRGALI GSIQIQYDRG DRSEWSARHG TSGHITHRVK LDAPHEVLTC
501: VRGYYNADPA EGPRALRSIT FVSNRGRYGP FGDEVGTYFS SPATAEGKVV GFHGRSGQHL DAIGVHMQHW QGDRRAAPKY VLSKYLF
001: MSVEGKPASL GPWGGQSGHA WDDGMYTTVK QIIIAHGSGI DSIQIEYDKN GSSVWSEKRG GKGGKKFDKV KFDYPHEYLI SVNGTYGSFD VWGTICVRSL
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF
Arabidopsis Description
JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.