Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU78268 | Sorghum | cytosol, nucleus, plastid | 94.46 | 94.78 |
| Os05t0508400-01 | Rice | cytoskeleton, cytosol, plastid | 81.04 | 79.97 |
| TraesCS1D01G327100.1 | Wheat | cytosol | 75.0 | 76.15 |
| HORVU1Hr1G075520.2 | Barley | cytosol | 74.5 | 75.77 |
| TraesCS1A01G325500.1 | Wheat | cytosol | 73.66 | 73.78 |
| TraesCS1B01G338600.1 | Wheat | cytosol | 74.66 | 73.43 |
| KRG98276 | Soybean | cytosol | 50.5 | 51.1 |
| KRH30293 | Soybean | cytosol | 50.0 | 50.59 |
| KRH72685 | Soybean | peroxisome | 43.96 | 47.9 |
| VIT_18s0001g13210.t01 | Wine grape | cytosol | 52.68 | 46.87 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 47.15 | 46.76 |
| Bra016496.1-P | Field mustard | cytosol | 45.47 | 46.48 |
| Bra025760.1-P | Field mustard | extracellular | 47.15 | 46.29 |
| CDY63700 | Canola | cytosol | 45.13 | 45.98 |
| PGSC0003DMT400021541 | Potato | cytosol | 49.33 | 44.95 |
| Solyc10g078600.1.1 | Tomato | cytosol | 48.99 | 44.85 |
| CDX96652 | Canola | extracellular | 45.47 | 44.06 |
| Zm00001d009416_P001 | Maize | cytosol, mitochondrion | 13.42 | 34.63 |
| Zm00001d012640_P010 | Maize | endoplasmic reticulum | 39.6 | 33.1 |
Protein Annotations
| EMBL:BT039527 | EnsemblPlants:Zm00001d038651_P004 | EnsemblPlants:Zm00001d038651_T004 | EnsemblPlantsGene:Zm00001d038651 | EntrezGene:100272821 | Gene3D:2.100.10.30 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom |
| InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 | PFscan:PS51752 | ProteinID:AQK87095.1 | SEG:seg |
| SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI00017B79A0 | UniProt:B4FQY9 | MapMan:35.1 | : |
Description
Jacalin-related lectin 3
Coordinates
chr6:+:161810475..161813487
Molecular Weight (calculated)
64570.7 Da
IEP (calculated)
8.452
GRAVY (calculated)
-0.335
Length
596 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIKSINGKS PIVVGPWGGT GGYPWDDGVY STIRQIVIGH GAAIDSIRIE YDLKGRSVWS ETHGGTDGGS ETDKVKLDFP DEVLVSVSGH YGSVCGTPVI
101: IRSLTFQSNS STYGPFGTED GTPFSLPVSS GKIIGFHGRS GSYLNSIGFY LKQVHFPTPV NPSPASPLSL PSPQSRNSAY GLTGGDARPD MVLAVRDRGD
201: SYAVYASNHP KQQYTNPSPD GAIWNKMVSV PSYYGDTTGA AAVGGSPQTY GPWGGSGGTI FDDGVYTGVW QINLTRAVGI SSIKVLYDRN GQAVWGNKHG
301: FSSGVIPDKI IFDFPSEVLT HITGFYDSAI IMGPTVVRSL TFHTNKRTYG PYGDEYGTYF STSFTNGRIV GFHGREGWYI DGIGVHVQEG KVAQQRFVSR
401: PKTPTSPLVH YNMLAQAPSA TYTDGEVAYG MVKEPVPMGP GPWGGEGGRA WDDGVYTGVK QIYVMRGAFI GSIQIEYDRS GHSIWSSRHG NSGHITHRVK
501: LDFPHEVLTC VYGYYNTSKE DGPRVLRSLT FLTNRGKYGP FGDEFGAYFS SATTEGKVVG FHGRSGQHLD AIGVHMQHWL GDRRPAPKYV LSKYLF
101: IRSLTFQSNS STYGPFGTED GTPFSLPVSS GKIIGFHGRS GSYLNSIGFY LKQVHFPTPV NPSPASPLSL PSPQSRNSAY GLTGGDARPD MVLAVRDRGD
201: SYAVYASNHP KQQYTNPSPD GAIWNKMVSV PSYYGDTTGA AAVGGSPQTY GPWGGSGGTI FDDGVYTGVW QINLTRAVGI SSIKVLYDRN GQAVWGNKHG
301: FSSGVIPDKI IFDFPSEVLT HITGFYDSAI IMGPTVVRSL TFHTNKRTYG PYGDEYGTYF STSFTNGRIV GFHGREGWYI DGIGVHVQEG KVAQQRFVSR
401: PKTPTSPLVH YNMLAQAPSA TYTDGEVAYG MVKEPVPMGP GPWGGEGGRA WDDGVYTGVK QIYVMRGAFI GSIQIEYDRS GHSIWSSRHG NSGHITHRVK
501: LDFPHEVLTC VYGYYNTSKE DGPRVLRSLT FLTNRGKYGP FGDEFGAYFS SATTEGKVVG FHGRSGQHLD AIGVHMQHWL GDRRPAPKYV LSKYLF
001: MSVEGKPASL GPWGGQSGHA WDDGMYTTVK QIIIAHGSGI DSIQIEYDKN GSSVWSEKRG GKGGKKFDKV KFDYPHEYLI SVNGTYGSFD VWGTICVRSL
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF
Arabidopsis Description
JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.