Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G327100.1 | Wheat | cytosol | 95.8 | 97.1 |
| TraesCS1B01G338600.1 | Wheat | cytosol | 96.13 | 94.39 |
| HORVU1Hr1G075520.2 | Barley | cytosol | 92.94 | 94.37 |
| OQU78268 | Sorghum | cytosol, nucleus, plastid | 74.12 | 74.24 |
| Os05t0508400-01 | Rice | cytoskeleton, cytosol, plastid | 74.79 | 73.68 |
| Zm00001d038651_P004 | Maize | cytosol, nucleus, plastid | 73.78 | 73.66 |
| TraesCS3A01G321000.1 | Wheat | plastid | 41.51 | 54.77 |
| KRG98276 | Soybean | cytosol | 48.07 | 48.56 |
| KRH30293 | Soybean | cytosol | 47.56 | 48.05 |
| KRH72685 | Soybean | peroxisome | 41.34 | 44.97 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 45.38 | 44.93 |
| Bra016496.1-P | Field mustard | cytosol | 42.52 | 43.4 |
| Bra025760.1-P | Field mustard | extracellular | 44.2 | 43.33 |
| VIT_18s0001g13210.t01 | Wine grape | cytosol | 48.57 | 43.13 |
| CDY63700 | Canola | cytosol | 42.18 | 42.91 |
| PGSC0003DMT400021541 | Potato | cytosol | 45.38 | 41.28 |
| CDX96652 | Canola | extracellular | 42.52 | 41.14 |
| Solyc10g078600.1.1 | Tomato | cytosol | 44.87 | 41.01 |
| TraesCS6A01G105700.1 | Wheat | cytosol | 9.08 | 38.85 |
| TraesCS7A01G256100.1 | Wheat | cytosol | 9.24 | 35.48 |
| TraesCS1A01G363600.1 | Wheat | cytosol | 11.76 | 31.82 |
| TraesCS3A01G131600.1 | Wheat | cytosol | 7.73 | 24.86 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G325500.1 | EnsemblPlantsGene:TraesCS1A01G325500 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 |
| PFscan:PS51752 | SEG:seg | SMART:SM00915 | SUPFAM:SSF51101 | TIGR:cd09612 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1A:+:516375805..516378310
Molecular Weight (calculated)
64220.9 Da
IEP (calculated)
7.473
GRAVY (calculated)
-0.429
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIMSAANGK SPIVVGPWGG TGGYPWDDGV YSTVCQIMIT HGAAVDSIRI QYDLKGHSIW SQTHGSTEDG SETDKVKLDV PGETLLSVSG HYGSVCGSPI
101: IIRSLTFQSN RSKYGPFGTE DGTPFSLPVS SGKIIGFHGR SGSYLNSIGF YLKQVHVPIP SPPSYPASPQ IPTAAAYSRH GYTVAEVDDE PEHDMALAVR
201: DRADGYAVYG AGYPKQQYAH PSPDYHDGSI MNKMVSYPSS YRAAAMSGPE THGPWGGSGG TIFDDGVYTG VWQINLTRAV GVTSMKVLYD RHGQAVWGNK
301: HGFSSGVPPD KIAFDFPTEV LTHITGYYGP TIIMGPTAVR SLTFHTNRRR YGPYGDEYGT YFSTSFADGR VVGFHGREGW YIDGIGVHVQ RGKVPSSSLR
401: RAASRSPSPA PRSDYDPGDV DEEVPYAAMV KEPAAAGPGP WGGPGGRAWD DGVYAGVNQV YVTRGALIGS IQIQYDRGDR SEWSARHGTS GHITHRVKLD
501: APHEVLTCVR GYYNADPAEG PRALRSITFV SNRGRYGPFG DEVGTYFSSP ATAEGKVVGF HGRSGQHLDA IGVHMQHWQG DRRAGPKYVL SKYLF
101: IIRSLTFQSN RSKYGPFGTE DGTPFSLPVS SGKIIGFHGR SGSYLNSIGF YLKQVHVPIP SPPSYPASPQ IPTAAAYSRH GYTVAEVDDE PEHDMALAVR
201: DRADGYAVYG AGYPKQQYAH PSPDYHDGSI MNKMVSYPSS YRAAAMSGPE THGPWGGSGG TIFDDGVYTG VWQINLTRAV GVTSMKVLYD RHGQAVWGNK
301: HGFSSGVPPD KIAFDFPTEV LTHITGYYGP TIIMGPTAVR SLTFHTNRRR YGPYGDEYGT YFSTSFADGR VVGFHGREGW YIDGIGVHVQ RGKVPSSSLR
401: RAASRSPSPA PRSDYDPGDV DEEVPYAAMV KEPAAAGPGP WGGPGGRAWD DGVYAGVNQV YVTRGALIGS IQIQYDRGDR SEWSARHGTS GHITHRVKLD
501: APHEVLTCVR GYYNADPAEG PRALRSITFV SNRGRYGPFG DEVGTYFSSP ATAEGKVVGF HGRSGQHLDA IGVHMQHWQG DRRAGPKYVL SKYLF
001: MVLTSSYSVE GKPASLGPWG GQSGHAWDDG MYTTVKQIII AHGSGIDSIQ IEYDKNGSSV WSEKRGGKGG KKFDKVKFDY PHEYLISVNG TYGSFDVWGT
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F
Arabidopsis Description
JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [plastid,cytoskeleton,cytosol]
SUBAcon: [plastid,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.