Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016496.1-P | Field mustard | cytosol | 97.95 | 98.28 |
| CDX96652 | Canola | extracellular | 97.27 | 92.52 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 77.44 | 75.37 |
| KRG98276 | Soybean | cytosol | 55.56 | 55.18 |
| KRH30293 | Soybean | cytosol | 55.21 | 54.84 |
| KRH72685 | Soybean | peroxisome | 50.26 | 53.75 |
| VIT_18s0001g13210.t01 | Wine grape | cytosol | 55.56 | 48.51 |
| KXG33492 | Sorghum | cytosol | 47.52 | 47.12 |
| PGSC0003DMT400021541 | Potato | cytosol | 52.65 | 47.09 |
| Solyc10g078600.1.1 | Tomato | cytosol | 52.14 | 46.85 |
| Os01t0775500-01 | Rice | cytosol, mitochondrion | 27.52 | 46.13 |
| Zm00001d038651_P004 | Maize | cytosol, nucleus, plastid | 45.98 | 45.13 |
| OQU78268 | Sorghum | cytosol, nucleus, plastid | 45.81 | 45.12 |
| Os05t0508400-01 | Rice | cytoskeleton, cytosol, plastid | 45.98 | 44.54 |
| TraesCS1D01G327100.1 | Wheat | cytosol | 43.25 | 43.1 |
| HORVU1Hr1G075520.2 | Barley | cytosol | 42.91 | 42.83 |
| HORVU3Hr1G075960.3 | Barley | plastid | 32.65 | 42.54 |
| TraesCS1A01G325500.1 | Wheat | cytosol | 42.91 | 42.18 |
| TraesCS3D01G310300.1 | Wheat | plastid | 32.48 | 42.13 |
| TraesCS3B01G344800.1 | Wheat | plastid | 32.31 | 41.91 |
| TraesCS3A01G321000.1 | Wheat | plastid | 32.31 | 41.91 |
| TraesCS1B01G338600.1 | Wheat | cytosol | 43.25 | 41.75 |
| OQU87644 | Sorghum | cytosol | 15.9 | 39.08 |
| CDX77840 | Canola | cytosol | 5.81 | 35.79 |
| CDX82402 | Canola | cytosol, plasma membrane | 16.58 | 32.66 |
| CDX93274 | Canola | cytosol | 12.31 | 32.0 |
| CDY28362 | Canola | cytosol, nucleus, plastid | 11.79 | 31.8 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 12.48 | 31.74 |
| CDY65744 | Canola | peroxisome | 15.21 | 31.34 |
| CDY22879 | Canola | cytosol | 23.08 | 31.18 |
| CDX82401 | Canola | cytosol | 13.85 | 30.45 |
| CDX90860 | Canola | cytosol | 20.0 | 30.31 |
| CDY21999 | Canola | extracellular | 8.89 | 30.06 |
| CDY06998 | Canola | cytosol | 10.6 | 29.81 |
| CDY20195 | Canola | cytosol | 21.54 | 29.72 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 10.6 | 29.67 |
| CDX82115 | Canola | extracellular | 12.65 | 29.6 |
| CDY13177 | Canola | extracellular | 15.73 | 29.11 |
| CDX74856 | Canola | cytosol | 22.22 | 28.26 |
| CDY28360 | Canola | cytosol | 8.21 | 28.24 |
| CDY07657 | Canola | cytosol | 21.54 | 27.75 |
| CDY20197 | Canola | cytosol | 9.74 | 27.67 |
| CDX93273 | Canola | cytosol | 21.37 | 27.41 |
| CDY07000 | Canola | cytosol | 20.68 | 27.38 |
| CDY02548 | Canola | cytosol | 20.34 | 27.36 |
| CDY24969 | Canola | cytosol | 21.2 | 27.31 |
| CDY54394 | Canola | cytosol | 4.62 | 27.0 |
| CDX75882 | Canola | cytosol | 13.16 | 26.92 |
| CDY45640 | Canola | cytosol | 14.02 | 26.71 |
| CDY53520 | Canola | cytosol | 13.16 | 26.28 |
| CDY38589 | Canola | cytosol | 20.51 | 26.2 |
| CDY45301 | Canola | cytosol | 12.99 | 25.94 |
| CDY06997 | Canola | cytosol | 19.83 | 25.89 |
| Zm00001d012640_P010 | Maize | endoplasmic reticulum | 31.28 | 25.67 |
| CDY59556 | Canola | cytosol | 19.49 | 25.5 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 15.73 | 25.48 |
| CDY06999 | Canola | cytosol | 13.85 | 25.47 |
| CDX93275 | Canola | cytosol | 19.32 | 25.22 |
| CDY32783 | Canola | cytosol | 21.71 | 24.28 |
| CDY47758 | Canola | cytosol | 21.71 | 23.92 |
| CDY46535 | Canola | cytosol | 15.73 | 23.9 |
| CDY53442 | Canola | cytosol | 15.38 | 22.78 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 21.03 | 21.85 |
| CDX79175 | Canola | cytosol | 11.28 | 21.71 |
| CDY72239 | Canola | cytosol | 11.45 | 21.54 |
| CDY70857 | Canola | cytosol | 15.38 | 21.48 |
| CDX82963 | Canola | cytosol | 15.38 | 21.48 |
| CDY69096 | Canola | cytosol | 21.37 | 21.37 |
| CDX92074 | Canola | cytosol | 23.59 | 21.23 |
| CDY60590 | Canola | cytosol | 21.2 | 21.2 |
| CDY68611 | Canola | cytosol | 9.57 | 21.13 |
| CDY43099 | Canola | cytosol | 24.1 | 20.83 |
| CDY40959 | Canola | cytosol | 17.95 | 20.59 |
| CDY43910 | Canola | cytosol | 24.62 | 19.41 |
| CDY70821 | Canola | cytosol | 14.02 | 18.3 |
| CDY59365 | Canola | cytosol | 21.88 | 16.04 |
| CDY02564 | Canola | cytosol | 24.27 | 15.17 |
| CDY51197 | Canola | cytosol | 23.08 | 15.03 |
| CDY51196 | Canola | cytosol | 23.76 | 14.95 |
| CDX87871 | Canola | cytosol | 22.91 | 14.58 |
| CDY22878 | Canola | cytosol | 24.44 | 14.56 |
| CDY43090 | Canola | cytosol | 6.32 | 13.36 |
| CDY02563 | Canola | cytosol, extracellular | 23.93 | 13.21 |
| CDY51195 | Canola | cytosol, extracellular | 23.59 | 12.97 |
| CDY47825 | Canola | cytosol | 15.21 | 11.22 |
| CDY47824 | Canola | cytosol | 6.5 | 10.64 |
| CDY34134 | Canola | cytosol | 2.05 | 5.77 |
| Os01t0775600-01 | Rice | cytosol | 0.85 | 2.31 |
Protein Annotations
| EnsemblPlants:CDY63700 | EnsemblPlantsGene:GSBRNA2T00039555001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 |
| PFscan:PS51752 | ProteinID:CDY63700 | ProteinID:CDY63700.1 | SEG:seg | SMART:SM00915 | SUPFAM:SSF51101 |
| UniParc:UPI0004EF37F9 | UniProt:A0A078J963 | MapMan:35.1 | : | : | : |
Description
BnaC08g19180DBnaC08g19180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J963]
Coordinates
chrLK034339:-:18101..21366
Molecular Weight (calculated)
63779.5 Da
IEP (calculated)
9.535
GRAVY (calculated)
-0.468
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNVQGKPAS VGPWGGQSGH AWDDGTFTTV RQIVIAHGYS IDSIQIEYDK NGTSVWSEKR GGKGGIKFDK VKLDYPHEYL TSVKGTYSAF DVWGNLCVRS
101: LTFESNRKLY GPFGVESGTY FTLPKSDSMI IGFYGKAGWY LDAIGAYLKP IPKETNPTSK MVLHSPQNVP RGVKKLEHSG NIHGSVGQNF DMVGLKQKDS
201: TLSSHEGHVD AEITKHKLVT DTEKLQPKAG GGVKIHGPWG GIGGIMFDDG IYTGVRQINL SRSVGIVWMK VCYDFKGQAV WGSKHGGRGG FKHDKIVFDY
301: PSEVLTHITG TYGPLVYMGP NVIKSLTFHT NKGKHGPCGE EQGPSFTHKI DEGKVVGFHG REGIFLDSIG VHVMPCKISP FKPSPHNATV PHNNTGVGAN
401: KLVLAVNGHG EKFERGVVKE PTPNGSGPWG GNGGKPWDDG VFSGIKQIFV TRANDAISSL QIEYDKNGQS VWSVEHGGHS GVATHRIILE YPNETLTCIS
501: GYYGPLNNSD KSNVVKSLSL YTSRGKYGPY GEETGTFFTS TKTQGKVLGL HGRSSSYLDA VGVHMQQRLV DNKTQFNRTS CFKRY
101: LTFESNRKLY GPFGVESGTY FTLPKSDSMI IGFYGKAGWY LDAIGAYLKP IPKETNPTSK MVLHSPQNVP RGVKKLEHSG NIHGSVGQNF DMVGLKQKDS
201: TLSSHEGHVD AEITKHKLVT DTEKLQPKAG GGVKIHGPWG GIGGIMFDDG IYTGVRQINL SRSVGIVWMK VCYDFKGQAV WGSKHGGRGG FKHDKIVFDY
301: PSEVLTHITG TYGPLVYMGP NVIKSLTFHT NKGKHGPCGE EQGPSFTHKI DEGKVVGFHG REGIFLDSIG VHVMPCKISP FKPSPHNATV PHNNTGVGAN
401: KLVLAVNGHG EKFERGVVKE PTPNGSGPWG GNGGKPWDDG VFSGIKQIFV TRANDAISSL QIEYDKNGQS VWSVEHGGHS GVATHRIILE YPNETLTCIS
501: GYYGPLNNSD KSNVVKSLSL YTSRGKYGPY GEETGTFFTS TKTQGKVLGL HGRSSSYLDA VGVHMQQRLV DNKTQFNRTS CFKRY
001: MVLTSSYSVE GKPASLGPWG GQSGHAWDDG MYTTVKQIII AHGSGIDSIQ IEYDKNGSSV WSEKRGGKGG KKFDKVKFDY PHEYLISVNG TYGSFDVWGT
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F
Arabidopsis Description
JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [plastid,cytoskeleton,cytosol]
SUBAcon: [plastid,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.