Factsheet for Os01t0775600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012640_P010	Maize	endoplasmic reticulum	86.57	26.23
Os05t0541800-01	Rice	cytosol, mitochondrion, plastid	0.93	2.15
OQU87644	Sorghum	cytosol	2.31	2.1
Os01t0775500-01	Rice	cytosol, mitochondrion	2.78	1.72
CDX96652	Canola	extracellular	4.17	1.46
Os05t0508400-01	Rice	cytoskeleton, cytosol, plastid	3.7	1.32
KXG33492	Sorghum	cytosol	3.24	1.19
Bra025760.1-P	Field mustard	extracellular	3.24	1.15
KRG98276	Soybean	cytosol	2.78	1.02
KRH30293	Soybean	cytosol	2.78	1.02
Solyc10g078600.1.1	Tomato	cytosol	2.78	0.92
PGSC0003DMT400021541	Potato	cytosol	2.78	0.92
Bra016496.1-P	Field mustard	cytosol	2.31	0.86
CDY63700	Canola	cytosol	2.31	0.85
VIT_18s0001g13210.t01	Wine grape	cytosol	2.31	0.75
Os01t0706800-00	Rice	mitochondrion	0.93	0.75
AT1G19715.3	Thale cress	cytoskeleton, cytosol, plastid	1.85	0.67
TraesCS3A01G321000.1	Wheat	plastid	1.39	0.67
TraesCS3B01G344800.1	Wheat	plastid	1.39	0.67
TraesCS3D01G310300.1	Wheat	plastid	1.39	0.67
KRH72685	Soybean	peroxisome	1.39	0.55
HORVU3Hr1G075960.3	Barley	plastid	0.93	0.45
Os04t0330200-01	Rice	mitochondrion	0.0	0.0
Os04t0200400-00	Rice	mitochondrion	0.0	0.0

Protein Annotations

MapMan:35.1	EntrezGene:4327889	EMBL:AK060390	EMBL:AK122081	ProteinID:BAD53233.1	ProteinID:BAF06325.2
ProteinID:BAS74598.1	InterPro:CRA_dom	InterPro:CTLH/CRA	InterPro:CTLH_C	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0030246	InterPro:IPR006594	InterPro:IPR006595	InterPro:LisH	EnsemblPlantsGene:Os01g0775600
EnsemblPlants:Os01t0775600-01	PFAM:PF10607	PFscan:PS50896	PFscan:PS50897	PANTHER:PTHR12864	PANTHER:PTHR12864:SF21
UniProt:Q5ZAY8	SMART:SM00667	SMART:SM00668	SMART:SM00757	UniParc:UPI0000446CAB	RefSeq:XP_015621652.1

Description

CT11-RanBPM domain containing protein. (Os01t0775600-01);CT11-RanBPM domain containing protein. (Os01t0775600-02)

Coordinates

chr1:-:32815113..32819452

Molecular Weight (calculated)

24799.7 Da

IEP (calculated)

4.876

GRAVY (calculated)

-0.251

Length

216 amino acids

Sequence
(BLAST)

001: MMDLDPRLYE NVSVSDNDVR NIVLSYLMHN CFKETAETFL SSTGLELPVD YTVDVDKRKA IFSFVLEGNA LKAIDLTEEL APNLLENDMD LHFDLLSLHF
101: IELVRSRKCT EALEFGQKKL TPFGKVPKYV EKLEDFMALL AYEEPEKSPM FHLLSPEYRQ NVADSLNRAV LAHANRPAYS SLERVIQQAT VVRQYLQQEV
201: GKDSYPPFSL KAFLNK

Best Arabidopsis Sequence Match ( AT1G06060.1 )
(BLAST)

001: MDPRQFEHTV VADNDIHSIV MSYLLHNCFN ETADSLASST GVKQPAIDRD NMERRKQIIH FILERKALKA FELTEQLAQD LLEKNKDLQF DLLCLHFVEL
101: ICAGNCTEAL KFGKTRLAPF GKVKKYVEKL EDVMALLAYE DPEKSPMFHL LSSEYRQQVA DNLNRTILEH TNHPSYTPME RIIQQVTVVR QYLTEENGKD
201: AFPPFSLKDS LKG

Arabidopsis Description

At1g06060 [Source:UniProtKB/TrEMBL;Acc:Q9LNE1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.