Factsheet for Os01t0706800-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
extracellular 1
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0541800-01	Rice	cytosol, mitochondrion, plastid	17.16	49.46
OQU78369	Sorghum	mitochondrion	25.75	33.33
TraesCS1D01G368600.1	Wheat	mitochondrion	26.87	32.73
TraesCS1B01G380700.1	Wheat	mitochondrion	26.12	31.82
TraesCS1A01G363600.1	Wheat	cytosol	26.12	31.82
Zm00001d009416_P001	Maize	cytosol, mitochondrion	27.24	31.6
GSMUA_Achr1P05130_001	Banana	cytosol	20.52	27.92
HORVU1Hr1G079360.2	Barley	extracellular	27.24	27.86
KRH23344	Soybean	cytosol	18.66	27.62
Bra008068.1-P	Field mustard	cytosol	17.54	26.7
AT1G73040.1	Thale cress	cytosol	17.54	26.7
PGSC0003DMT400006686	Potato	cytosol	19.78	26.37
Solyc03g121300.2.1	Tomato	cytosol	19.78	26.37
VIT_09s0002g02620.t01	Wine grape	cytosol	17.91	23.41
VIT_09s0002g02610.t01	Wine grape	cytosol	18.28	23.33
CDY48032	Canola	cytosol, extracellular, nucleus	17.16	20.0
Os04t0200400-00	Rice	mitochondrion	13.81	19.58
Os04t0330200-01	Rice	mitochondrion	13.06	18.52
CDX82115	Canola	extracellular	17.16	18.4
PGSC0003DMT400006433	Potato	cytosol, nucleus, peroxisome	6.72	13.24
Os01t0775500-01	Rice	cytosol, mitochondrion	13.81	10.6
Os05t0508400-01	Rice	cytoskeleton, cytosol, plastid	19.78	8.77
Os01t0775600-01	Rice	cytosol	0.75	0.93

Protein Annotations

EnsemblPlants:Os01t0706800-00	EnsemblPlantsGene:Os01g0706800	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR45172	PFAM:PF01419
PFscan:PS51752	ProteinID:BAS73947.1	SEG:seg	SUPFAM:SSF51101	UniParc:UPI000393BE84	UniProt:A0A0P0V7D7
MapMan:35.2	:	:	:	:	:

Description

Similar to agglutinin. (Os01t0706800-00)

Coordinates

chr1:-:29323176..29323982

Molecular Weight (calculated)

29059.5 Da

IEP (calculated)

12.121

GRAVY (calculated)

-0.710

Length

268 amino acids

Sequence
(BLAST)

001: TQFFFLLFQQ PGHYQQRRMV ASSKAIKVGP WGGTAGSPWD DGAHRGVRSI ALTYGRFLES MRVEYDRNGH PVHGEKHGGG GDGRTSRTAE VRACVRAPVQ
101: VSSSTKKNVH LSESLPLSLI DAGEAGLPVR VPDRRRRPVR PGGARRIDGG SVADVPDEHG GGARAVRGRV GGRGAVRVPD GGRRGGRVQR EERVVAPRRR
201: RPARRGAAPG DALRRGPGAR RHGVPVFRLR ERRQQLGSAS AAAEEEAVRV VLQISRQNDS FFCGINSD

Best Arabidopsis Sequence Match ( AT1G73040.1 )
(BLAST)

001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA

Arabidopsis Description

JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.