Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- cytosol 2
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra008068.1-P | Field mustard | cytosol | 52.38 | 62.5 |
VIT_09s0002g02620.t01 | Wine grape | cytosol | 60.48 | 61.95 |
KRH23344 | Soybean | cytosol | 53.33 | 61.88 |
AT1G73040.1 | Thale cress | cytosol | 50.48 | 60.23 |
GSMUA_Achr1P05130_001 | Banana | cytosol | 54.76 | 58.38 |
Solyc03g121300.2.1 | Tomato | cytosol | 53.33 | 55.72 |
PGSC0003DMT400006686 | Potato | cytosol | 51.9 | 54.23 |
PGSC0003DMT400006433 | Potato | cytosol, nucleus, peroxisome | 32.38 | 50.0 |
CDY48032 | Canola | cytosol, extracellular, nucleus | 51.43 | 46.96 |
Os05t0541800-01 | Rice | cytosol, mitochondrion, plastid | 19.52 | 44.09 |
CDX82115 | Canola | extracellular | 51.9 | 43.6 |
OQU78369 | Sorghum | mitochondrion | 39.52 | 40.1 |
TraesCS1D01G368600.1 | Wheat | mitochondrion | 38.57 | 36.82 |
Zm00001d009416_P001 | Maize | cytosol, mitochondrion | 40.0 | 36.36 |
TraesCS1B01G380700.1 | Wheat | mitochondrion | 38.1 | 36.36 |
TraesCS1A01G363600.1 | Wheat | cytosol | 38.1 | 36.36 |
KXG33219 | Sorghum | mitochondrion | 35.24 | 35.58 |
HORVU1Hr1G079360.2 | Barley | extracellular | 39.05 | 31.3 |
Os04t0330200-01 | Rice | mitochondrion | 27.62 | 30.69 |
Os04t0200400-00 | Rice | mitochondrion | 27.62 | 30.69 |
Os01t0706800-00 | Rice | mitochondrion | 23.33 | 18.28 |
VIT_18s0001g13210.t01 | Wine grape | cytosol | 37.14 | 11.64 |
Protein Annotations
EntrezGene:100265130 | wikigene:100265130 | Gene3D:2.100.10.30 | MapMan:35.1 | ProteinID:CBI35988 | ProteinID:CBI35988.3 |
UniProt:D7U042 | EMBL:FN596494 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 | InterPro:IPR001229 |
InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | EntrezGene:LOC100265130 | wikigene:LOC100265130 |
PFAM:PF01419 | PFscan:PS51752 | PANTHER:PTHR45172 | SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI0001BE46A5 |
ArrayExpress:VIT_09s0002g02610 | EnsemblPlantsGene:VIT_09s0002g02610 | EnsemblPlants:VIT_09s0002g02610.t01 | RefSeq:XP_002276378 | RefSeq:XP_002276378.2 | SEG:seg |
Description
No Description!
Coordinates
chr9:-:2383365..2386577
Molecular Weight (calculated)
23151.6 Da
IEP (calculated)
10.045
GRAVY (calculated)
-0.523
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFSFKGYIS SYKEGEKDHS NEKKLSMVVG AWGGDGGSSW DDGSYSGVRG ITIVYDRCID WIRVVYDKNG KPVTGQKHGG VGGNKTAEVK LQYPEEILIS
101: VSGHYCPVVY GGSPVIRSLT FKSNRRTFGP FGVEEGTPFS LSMDGGRIVG FQGRSGWYLD AIGFHLSQTR STKLFEKVQK KLQKIASMAI SAPKDSEATP
201: RMKKNQSMRQ
101: VSGHYCPVVY GGSPVIRSLT FKSNRRTFGP FGVEEGTPFS LSMDGGRIVG FQGRSGWYLD AIGFHLSQTR STKLFEKVQK KLQKIASMAI SAPKDSEATP
201: RMKKNQSMRQ
001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
Arabidopsis Description
JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.