Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008068.1-P | Field mustard | cytosol | 89.2 | 89.2 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 88.64 | 67.83 |
| CDX82115 | Canola | extracellular | 88.07 | 62.0 |
| KRH23344 | Soybean | cytosol | 59.09 | 57.46 |
| VIT_09s0002g02610.t01 | Wine grape | cytosol | 60.23 | 50.48 |
| GSMUA_Achr1P05130_001 | Banana | cytosol | 55.11 | 49.24 |
| Solyc03g121300.2.1 | Tomato | cytosol | 54.55 | 47.76 |
| PGSC0003DMT400006686 | Potato | cytosol | 54.55 | 47.76 |
| VIT_09s0002g02620.t01 | Wine grape | cytosol | 55.11 | 47.32 |
| Os05t0541800-01 | Rice | cytosol, mitochondrion, plastid | 23.3 | 44.09 |
| PGSC0003DMT400006433 | Potato | cytosol, nucleus, peroxisome | 32.95 | 42.65 |
| OQU78369 | Sorghum | mitochondrion | 44.89 | 38.16 |
| TraesCS1A01G363600.1 | Wheat | cytosol | 44.89 | 35.91 |
| TraesCS1D01G368600.1 | Wheat | mitochondrion | 44.89 | 35.91 |
| TraesCS1B01G380700.1 | Wheat | mitochondrion | 44.32 | 35.45 |
| Zm00001d009416_P001 | Maize | cytosol, mitochondrion | 44.32 | 33.77 |
| KXG33219 | Sorghum | mitochondrion | 37.5 | 31.73 |
| HORVU1Hr1G079360.2 | Barley | extracellular | 44.32 | 29.77 |
| Os04t0330200-01 | Rice | mitochondrion | 31.82 | 29.63 |
| Os04t0200400-00 | Rice | mitochondrion | 31.25 | 29.1 |
| Os01t0706800-00 | Rice | mitochondrion | 26.7 | 17.54 |
| AT3G16450.2 | Thale cress | cytosol | 23.86 | 14.0 |
| AT5G35950.1 | Thale cress | cytosol | 31.82 | 12.61 |
| AT5G35940.1 | Thale cress | cytosol | 31.25 | 12.39 |
| AT3G16440.2 | Thale cress | cytosol | 22.73 | 12.38 |
| AT5G46000.1 | Thale cress | cytosol | 26.7 | 11.87 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 40.34 | 11.81 |
| AT1G52100.1 | Thale cress | cytosol | 26.7 | 10.76 |
| AT1G52070.1 | Thale cress | extracellular | 18.18 | 10.16 |
| AT5G38540.1 | Thale cress | cytosol | 26.7 | 10.04 |
| AT1G52050.1 | Thale cress | extracellular | 17.61 | 9.9 |
| AT1G52120.2 | Thale cress | cytosol | 25.57 | 9.8 |
| AT2G25980.1 | Thale cress | cytosol | 25.0 | 9.8 |
| AT3G16430.2 | Thale cress | cytosol | 16.48 | 9.8 |
| AT3G16420.1 | Thale cress | cytosol | 16.48 | 9.73 |
| AT5G28520.1 | Thale cress | cytosol | 24.43 | 9.49 |
| AT1G52060.1 | Thale cress | extracellular | 15.91 | 8.92 |
| AT1G52130.1 | Thale cress | cytosol | 23.86 | 8.7 |
| AT3G16470.1 | Thale cress | cytosol | 22.16 | 8.65 |
| AT3G21380.1 | Thale cress | cytosol | 22.16 | 8.48 |
| AT2G39310.4 | Thale cress | cytosol | 21.59 | 8.3 |
| AT2G39330.2 | Thale cress | cytosol | 23.3 | 8.09 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 9.66 | 7.69 |
| AT1G57570.1 | Thale cress | mitochondrion | 26.7 | 7.65 |
| AT5G49850.1 | Thale cress | cytosol | 25.0 | 7.38 |
| AT1G52030.2 | Thale cress | cytosol | 26.14 | 7.17 |
| AT1G61230.1 | Thale cress | cytosol | 20.45 | 7.13 |
| AT1G60130.1 | Thale cress | cytosol | 23.86 | 7.0 |
| AT1G60095.1 | Thale cress | cytosol | 23.86 | 6.99 |
| AT5G38550.1 | Thale cress | cytosol | 23.3 | 6.9 |
| AT5G49870.1 | Thale cress | cytosol | 23.3 | 6.82 |
| AT3G16460.1 | Thale cress | cytosol | 27.27 | 6.81 |
| AT1G60110.2 | Thale cress | cytosol | 23.86 | 6.75 |
| AT1G52110.1 | Thale cress | mitochondrion | 23.3 | 6.67 |
| AT1G33790.2 | Thale cress | cytosol | 25.0 | 5.91 |
| AT1G52000.2 | Thale cress | cytosol | 21.59 | 5.21 |
| AT1G52040.1 | Thale cress | cytosol | 8.52 | 3.25 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:843635 | UniProt:A0A178WMS9 | ProteinID:AAD55651.1 | ProteinID:AEE35407.1 |
| ArrayExpress:AT1G73040 | EnsemblPlantsGene:AT1G73040 | RefSeq:AT1G73040 | TAIR:AT1G73040 | RefSeq:AT1G73040-TAIR-G | EnsemblPlants:AT1G73040.1 |
| TAIR:AT1G73040.1 | EMBL:BT021916 | EMBL:BT030616 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_001319369.1 |
| ProteinID:OAP18865.1 | PFAM:PF01419 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0025281 | PFscan:PS51752 | PANTHER:PTHR45172 | UniProt:Q9SSM3 | SMART:SM00915 |
| SUPFAM:SSF51101 | UniParc:UPI000009CD75 | SEG:seg | : | : | : |
Description
JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
Coordinates
chr1:-:27475060..27475962
Molecular Weight (calculated)
19561.3 Da
IEP (calculated)
9.741
GRAVY (calculated)
-0.535
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.