Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU78369 | Sorghum | mitochondrion | 50.96 | 51.21 |
| GSMUA_Achr1P05130_001 | Banana | cytosol | 37.02 | 39.09 |
| PGSC0003DMT400006686 | Potato | cytosol | 37.02 | 38.31 |
| Solyc03g121300.2.1 | Tomato | cytosol | 37.02 | 38.31 |
| AT1G73040.1 | Thale cress | cytosol | 31.73 | 37.5 |
| Bra008068.1-P | Field mustard | cytosol | 31.73 | 37.5 |
| KRH23344 | Soybean | cytosol | 32.21 | 37.02 |
| VIT_09s0002g02610.t01 | Wine grape | cytosol | 35.58 | 35.24 |
| VIT_09s0002g02620.t01 | Wine grape | cytosol | 34.62 | 35.12 |
| PGSC0003DMT400006433 | Potato | cytosol, nucleus, peroxisome | 22.12 | 33.82 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 30.77 | 27.83 |
| CDX82115 | Canola | extracellular | 31.25 | 26.0 |
| OQU87644 | Sorghum | cytosol | 18.75 | 16.39 |
| OQU78268 | Sorghum | cytosol, nucleus, plastid | 35.58 | 12.46 |
| KXG33492 | Sorghum | cytosol | 31.73 | 11.19 |
Protein Annotations
| EnsemblPlants:KXG33219 | EnsemblPlantsGene:SORBI_3003G272800 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PANTHER:PTHR45172 |
| PFAM:PF01419 | PFscan:PS51752 | ProteinID:KXG33219 | ProteinID:KXG33219.1 | SMART:SM00915 | SUPFAM:SSF51101 |
| UniParc:UPI00081AD814 | UniProt:A0A1B6Q5M3 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:60889598..60890425
Molecular Weight (calculated)
22550.5 Da
IEP (calculated)
9.551
GRAVY (calculated)
-0.472
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQPGGHHRR MVASTKVIKV GPWGGRGGSP WDDGPHRGVR SITVTYGRSL ESVRVEYADG NGRPVHGEKH GGGTDRSHSV KIDVDFPYEF LTGVSGCYGA
101: AHRGAPLVVR SVTFTTSRGT VHGPFGDADA DGVPFSYPME GGVVVGFTGR SGWHLDALGL YVAALRPETL RDVVQERGLM AYRSFVYGDA GPARHHQSGR
201: RPFEWCYK
101: AHRGAPLVVR SVTFTTSRGT VHGPFGDADA DGVPFSYPME GGVVVGFTGR SGWHLDALGL YVAALRPETL RDVVQERGLM AYRSFVYGDA GPARHHQSGR
201: RPFEWCYK
001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
Arabidopsis Description
JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.