CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009416_P001	Maize	cytosol, mitochondrion	82.13	73.59
TraesCS1D01G368600.1	Wheat	mitochondrion	71.98	67.73
TraesCS1A01G363600.1	Wheat	cytosol	71.5	67.27
TraesCS1B01G380700.1	Wheat	mitochondrion	70.05	65.91
Os05t0541800-01	Rice	cytosol, mitochondrion, plastid	28.5	63.44
HORVU1Hr1G079360.2	Barley	extracellular	70.05	55.34
KXG33219	Sorghum	mitochondrion	51.21	50.96
Bra008068.1-P	Field mustard	cytosol	39.61	46.59
AT1G73040.1	Thale cress	cytosol	38.16	44.89
GSMUA_Achr1P05130_001	Banana	cytosol	41.06	43.15
PGSC0003DMT400006686	Potato	cytosol	41.55	42.79
Solyc03g121300.2.1	Tomato	cytosol	41.06	42.29
PGSC0003DMT400006433	Potato	cytosol, nucleus, peroxisome	27.54	41.91
KRH23344	Soybean	cytosol	36.23	41.44
VIT_09s0002g02610.t01	Wine grape	cytosol	40.1	39.52
VIT_09s0002g02620.t01	Wine grape	cytosol	38.65	39.02
CDY48032	Canola	cytosol, extracellular, nucleus	39.13	35.22
CDX82115	Canola	extracellular	39.61	32.8
Os01t0706800-00	Rice	mitochondrion	33.33	25.75
OQU87644	Sorghum	cytosol	20.77	18.07
OQU78268	Sorghum	cytosol, nucleus, plastid	39.13	13.64
KXG33492	Sorghum	cytosol	35.75	12.54

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	UniProt:A0A1B6P9L4	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	ProteinID:KXG22439.1
EnsemblPlants:OQU78369	ProteinID:OQU78369	ProteinID:OQU78369.1	ProteinID:OQU78370.1	PFAM:PF01419	PFscan:PS51752
PANTHER:PTHR45172	SMART:SM00915	EnsemblPlantsGene:SORBI_3009G215100	SUPFAM:SSF51101	UniParc:UPI00081AC009	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:55993857..55995870

Molecular Weight (calculated)

22608.9 Da

IEP (calculated)

9.292

GRAVY (calculated)

-0.402

Length

207 amino acids

Sequence
(BLAST)

001: MQQHQRKMVV SKKLMKVGPW GGTGGHPWDD GGHSGIRSIT ISYDHRCMES ISVEYDRDGL AVPGERHGGA AASHTTQIKL SCPDEYLTTV SGHYAPIAHG
101: GSPVIRSLAF RTNLRAYGPF GAAEGTPFSF PVVGGVIVGF YGRSGWQLDA VGLYVAPLRP ETTYDRVQKL GLMAYRAVWQ RIGTQMQQQQ DEPVKKENGN
201: AQIVHTT

Best Arabidopsis Sequence Match ( AT1G73040.1 )
(BLAST)

001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA

Arabidopsis Description

JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.