Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0775500-01 | Rice | cytosol, mitochondrion | 66.39 | 45.27 |
| KXG33492 | Sorghum | cytosol | 88.24 | 35.59 |
| OQU78268 | Sorghum | cytosol, nucleus, plastid | 55.46 | 22.22 |
| OQU78369 | Sorghum | mitochondrion | 18.07 | 20.77 |
| KXG33219 | Sorghum | mitochondrion | 16.39 | 18.75 |
| KRH72685 | Soybean | peroxisome | 42.86 | 18.65 |
| KRG98276 | Soybean | cytosol | 44.54 | 18.0 |
| KRH30293 | Soybean | cytosol | 43.7 | 17.66 |
| CDY63700 | Canola | cytosol | 39.08 | 15.9 |
| Bra016496.1-P | Field mustard | cytosol | 38.66 | 15.78 |
| VIT_18s0001g13210.t01 | Wine grape | cytosol | 44.12 | 15.67 |
| Bra025760.1-P | Field mustard | extracellular | 39.92 | 15.65 |
| CDX96652 | Canola | extracellular | 38.66 | 14.96 |
| PGSC0003DMT400021541 | Potato | cytosol | 40.34 | 14.68 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 36.97 | 14.64 |
| Solyc10g078600.1.1 | Tomato | cytosol | 39.92 | 14.59 |
| TraesCS3A01G321000.1 | Wheat | plastid | 23.53 | 12.42 |
| TraesCS3B01G344800.1 | Wheat | plastid | 22.69 | 11.97 |
| TraesCS3D01G310300.1 | Wheat | plastid | 22.69 | 11.97 |
| HORVU3Hr1G075960.3 | Barley | plastid | 22.27 | 11.8 |
| Zm00001d012640_P010 | Maize | endoplasmic reticulum | 10.92 | 3.65 |
| Os01t0775600-01 | Rice | cytosol | 2.1 | 2.31 |
Protein Annotations
| EnsemblPlants:OQU87644 | EnsemblPlantsGene:SORBI_3003G314000 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PANTHER:PTHR45172 |
| PFAM:PF01419 | PFscan:PS51752 | ProteinID:OQU87644 | ProteinID:OQU87644.1 | SEG:seg | SMART:SM00915 |
| SUPFAM:SSF51101 | UniParc:UPI0009DC9073 | UniProt:A0A1W0VZU2 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr3:-:64228120..64230907
Molecular Weight (calculated)
26054.6 Da
IEP (calculated)
9.053
GRAVY (calculated)
-0.440
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVGPWGGLG GDPWDDGINS GVRQIIISHG AAIYSKQFEY DLRGSLVWSE KHGTSGGSSK TDQVKLNYPE EVLTSISGCY GALGASVVIR SLTFESNCSK
101: YGPFGTEQGT SFSLPVFTGK IVGFHGRSGT CLHSIGCHLN KENTTKLSKN APTIIRSYDR NGHRYADSSA GYDMILAVKD RGDNYNVLAS SVPKEQYPNN
201: PSKMSKMVSI PSFHSDNGTM TISTPVRFGP WWKQWYHI
101: YGPFGTEQGT SFSLPVFTGK IVGFHGRSGT CLHSIGCHLN KENTTKLSKN APTIIRSYDR NGHRYADSSA GYDMILAVKD RGDNYNVLAS SVPKEQYPNN
201: PSKMSKMVSI PSFHSDNGTM TISTPVRFGP WWKQWYHI
001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
Arabidopsis Description
JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.