CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30293	Soybean	cytosol	95.08	95.08
KRH72685	Soybean	peroxisome	67.4	72.58
Bra016496.1-P	Field mustard	cytosol	55.86	56.43
AT1G19715.3	Thale cress	cytoskeleton, cytosol, plastid	57.39	56.24
CDY63700	Canola	cytosol	55.18	55.56
Bra025760.1-P	Field mustard	extracellular	56.88	55.19
VIT_18s0001g13210.t01	Wine grape	cytosol	62.48	54.93
CDX96652	Canola	extracellular	55.18	52.85
KXG33492	Sorghum	cytosol	51.61	51.53
Solyc10g078600.1.1	Tomato	cytosol	56.54	51.15
PGSC0003DMT400021541	Potato	cytosol	56.71	51.07
OQU78268	Sorghum	cytosol, nucleus, plastid	51.27	50.84
Zm00001d038651_P004	Maize	cytosol, nucleus, plastid	51.1	50.5
Os05t0508400-01	Rice	cytoskeleton, cytosol, plastid	50.76	49.5
Os01t0775500-01	Rice	cytosol, mitochondrion	28.86	48.71
TraesCS1D01G327100.1	Wheat	cytosol	48.39	48.55
HORVU1Hr1G075520.2	Barley	cytosol	47.88	48.12
TraesCS1A01G325500.1	Wheat	cytosol	48.56	48.07
TraesCS1B01G338600.1	Wheat	cytosol	48.22	46.86
TraesCS3B01G344800.1	Wheat	plastid	35.82	46.78
TraesCS3A01G321000.1	Wheat	plastid	35.65	46.56
TraesCS3D01G310300.1	Wheat	plastid	35.31	46.12
HORVU3Hr1G075960.3	Barley	plastid	35.14	46.1
OQU87644	Sorghum	cytosol	18.0	44.54
KRH23344	Soybean	cytosol	13.24	43.09
Zm00001d012640_P010	Maize	endoplasmic reticulum	32.94	27.21
Os01t0775600-01	Rice	cytosol	1.02	2.78

Protein Annotations

EMBL:ACUP02010861	EnsemblPlants:KRG98276	EnsemblPlantsGene:GLYMA_18G061800	EntrezGene:100775599	Gene3D:2.100.10.30	GO:GO:0003674
GO:GO:0005488	GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant
InterPro:Jacalin-like_lectin_dom_sf	PFAM:PF01419	PFscan:PS51752	ProteinID:KRG98276	ProteinID:KRG98276.1	SEG:seg
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI000294B2CB	UniProt:I1MZY8	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr18:-:5612550..5616332

Molecular Weight (calculated)

64904.0 Da

IEP (calculated)

7.275

GRAVY (calculated)

-0.322

Length

589 amino acids

Sequence
(BLAST)

001: MSFEEKPVSV GPWGGNGGYH WDDGVYSTVR QLVIVHGEGI DSIQIEYDKQ GSSIWSLKYG GSGGYKIDKI KLDYPDEFLT SIDGYYGSLS QWGPIFIRSL
101: SFESNKKLYG PFGVEQGTYF SLPMTGGKIV GFHGRYGWHL DAIGVNLKSS QQPKPSKALS YSQNNMTNTT DNGRYSVIQG SVGQDYDIVL ALKQKDDFGK
201: SPTVKISSFK EPNNIEPKEK IVFVEKAPSM VEGVVTYGPW GGTGGYVFDD GPYTGVRQID LSRNVGIVWI RALYDLDGEP VWGYKHGGAG GFKHEKIIFD
301: FPYEVLTHIS GYYGSLMYMG PAVIRSLTFH TTKRSYGPFG DEYGTYFTTK LREGKVVGIH GRSGLFLDSL GVHAIEGKVI VPVATSPSME IISREPSISE
401: IDNPQWLVVA KPAPVEQASR CVIKEPAPCG PGPWGGDGGR PWDDGVFSGI KQIYLTKAPE GICSIQIEYD RYKQSVWSVK HGGNGGNTMH RIKLEYPNEV
501: LTCISGYYGS VTADEQPIII KSLTFHTSRG QYGPFGDEVG KYFTSTTTEG KVVGLHGRSS MYLDAIGVHM QHWLGGIQKT SKLSFFKLF

Best Arabidopsis Sequence Match ( AT1G19715.1 )
(BLAST)

001: MSVEGKPASL GPWGGQSGHA WDDGMYTTVK QIIIAHGSGI DSIQIEYDKN GSSVWSEKRG GKGGKKFDKV KFDYPHEYLI SVNGTYGSFD VWGTICVRSL
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF

Arabidopsis Description

JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.