Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- mitochondrion 1
- cytoskeleton 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU78268 | Sorghum | cytosol, nucleus, plastid | 81.95 | 83.33 |
| Zm00001d038651_P004 | Maize | cytosol, nucleus, plastid | 79.97 | 81.04 |
| HORVU1Hr1G075520.2 | Barley | cytosol | 75.33 | 77.65 |
| TraesCS1D01G327100.1 | Wheat | cytosol | 75.0 | 77.17 |
| TraesCS1A01G325500.1 | Wheat | cytosol | 73.68 | 74.79 |
| TraesCS1B01G338600.1 | Wheat | cytosol | 74.5 | 74.26 |
| Os01t0775500-01 | Rice | cytosol, mitochondrion | 37.09 | 64.18 |
| KRG98276 | Soybean | cytosol | 49.5 | 50.76 |
| KRH30293 | Soybean | cytosol | 49.17 | 50.42 |
| KRH72685 | Soybean | peroxisome | 44.04 | 48.63 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 47.19 | 47.42 |
| Bra016496.1-P | Field mustard | cytosol | 45.03 | 46.66 |
| CDY63700 | Canola | cytosol | 44.54 | 45.98 |
| Bra025760.1-P | Field mustard | extracellular | 46.19 | 45.96 |
| VIT_18s0001g13210.t01 | Wine grape | cytosol | 50.83 | 45.82 |
| Solyc10g078600.1.1 | Tomato | cytosol | 47.85 | 44.39 |
| PGSC0003DMT400021541 | Potato | cytosol | 48.01 | 44.34 |
| CDX96652 | Canola | extracellular | 44.87 | 44.06 |
| Os05t0541800-01 | Rice | cytosol, mitochondrion, plastid | 6.13 | 39.78 |
| Os04t0330200-01 | Rice | mitochondrion | 10.43 | 33.33 |
| Os04t0200400-00 | Rice | mitochondrion | 10.26 | 32.8 |
| Os01t0706800-00 | Rice | mitochondrion | 8.77 | 19.78 |
| Os01t0775600-01 | Rice | cytosol | 1.32 | 3.7 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:4339266 | ProteinID:AAT44259.1 | ProteinID:BAF17909.1 | ProteinID:BAS94810.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 |
| InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | EnsemblPlantsGene:Os05g0508400 | EnsemblPlants:Os05t0508400-01 | PFAM:PF01419 |
| PFscan:PS51752 | UniProt:Q6L4X6 | SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI00003A926B | RefSeq:XP_015639975.1 |
| SEG:seg | : | : | : | : | : |
Description
Mannose-binding lectin domain containing protein. (Os05t0508400-01)
Coordinates
chr5:+:25159955..25163398
Molecular Weight (calculated)
66328.5 Da
IEP (calculated)
7.525
GRAVY (calculated)
-0.448
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIKSSDGKS PIVVGPWGGT GGYPWDDGVY STVRQVIITH GAAIDSIRIE YDLKGSSVWS ETHGSTDGGS ETDKVKLDFP DEILVSVSGY YGSVCGTPVI
101: IRSLTFQSNR SIYGPFGTED GTPFSLPVSS GKIIGFHGRS GSYLNSIGFY LKQVNVSDRS NSPVLPQSRS ITSAYNKNGY SFPEGASGYD MVLAVRDRGD
201: SYAVYTSNYP NQQYTNPSPD YNDGIRWNKV PQTSPSLQMV SFPSGYGDRG GAALSSHETY GPWGGSGGTM FDDGMYTGVW QINLTRAVGI TSIKVLYDRN
301: GQAVWGNKHG FSGAVSPDKI VFDFPSEVLT HITGYYGTTM IMGPTVVRSL TFHTNKRRYG PYGDECGTYF STSFSDGRIV GFHGREGWYI DGIGVHVQEG
401: NLAAPRVSSR STIEMNPSLR YDMLAQSRSE TYNEVPYSMV KEPVPMGPGP WGGEGGRPWD DGVYTGVKQV YVMRGTFIGS IQIEYDRGDQ SVWSARHGTS
501: GHITHRIKLD YPHEVLTCVY GYYNTNREEG PRVLRSITFI SNRGKYGPFG EEFGAYFSSA KTEGKVVGFH GRSGQHLDAI GVHMQHWMGD RRPAPKYVLS
601: KYLF
101: IRSLTFQSNR SIYGPFGTED GTPFSLPVSS GKIIGFHGRS GSYLNSIGFY LKQVNVSDRS NSPVLPQSRS ITSAYNKNGY SFPEGASGYD MVLAVRDRGD
201: SYAVYTSNYP NQQYTNPSPD YNDGIRWNKV PQTSPSLQMV SFPSGYGDRG GAALSSHETY GPWGGSGGTM FDDGMYTGVW QINLTRAVGI TSIKVLYDRN
301: GQAVWGNKHG FSGAVSPDKI VFDFPSEVLT HITGYYGTTM IMGPTVVRSL TFHTNKRRYG PYGDECGTYF STSFSDGRIV GFHGREGWYI DGIGVHVQEG
401: NLAAPRVSSR STIEMNPSLR YDMLAQSRSE TYNEVPYSMV KEPVPMGPGP WGGEGGRPWD DGVYTGVKQV YVMRGTFIGS IQIEYDRGDQ SVWSARHGTS
501: GHITHRIKLD YPHEVLTCVY GYYNTNREEG PRVLRSITFI SNRGKYGPFG EEFGAYFSSA KTEGKVVGFH GRSGQHLDAI GVHMQHWMGD RRPAPKYVLS
601: KYLF
001: MSVEGKPASL GPWGGQSGHA WDDGMYTTVK QIIIAHGSGI DSIQIEYDKN GSSVWSEKRG GKGGKKFDKV KFDYPHEYLI SVNGTYGSFD VWGTICVRSL
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF
Arabidopsis Description
JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.