Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 2
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038651_P004 | Maize | cytosol, nucleus, plastid | 94.78 | 94.46 |
| Os05t0508400-01 | Rice | cytoskeleton, cytosol, plastid | 83.33 | 81.95 |
| TraesCS1D01G327100.1 | Wheat | cytosol | 75.25 | 76.15 |
| HORVU1Hr1G075520.2 | Barley | cytosol | 74.92 | 75.94 |
| TraesCS1A01G325500.1 | Wheat | cytosol | 74.24 | 74.12 |
| TraesCS1B01G338600.1 | Wheat | cytosol | 74.58 | 73.1 |
| KXG33492 | Sorghum | cytosol | 64.31 | 64.75 |
| OQU87644 | Sorghum | cytosol | 22.22 | 55.46 |
| KRG98276 | Soybean | cytosol | 50.84 | 51.27 |
| KRH30293 | Soybean | cytosol | 50.34 | 50.76 |
| KRH72685 | Soybean | peroxisome | 44.11 | 47.9 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 47.14 | 46.59 |
| VIT_18s0001g13210.t01 | Wine grape | cytosol | 52.53 | 46.57 |
| Bra016496.1-P | Field mustard | cytosol | 45.45 | 46.31 |
| CDY63700 | Canola | cytosol | 45.12 | 45.81 |
| Bra025760.1-P | Field mustard | extracellular | 46.63 | 45.63 |
| PGSC0003DMT400021541 | Potato | cytosol | 49.33 | 44.8 |
| Solyc10g078600.1.1 | Tomato | cytosol | 48.99 | 44.7 |
| CDX96652 | Canola | extracellular | 45.45 | 43.9 |
| OQU78369 | Sorghum | mitochondrion | 13.64 | 39.13 |
| KXG33219 | Sorghum | mitochondrion | 12.46 | 35.58 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | UniProt:C5Z0S3 | ProteinID:EES18470.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf |
| ProteinID:KXG22302.1 | EnsemblPlants:OQU78268 | ProteinID:OQU78268 | ProteinID:OQU78268.1 | PFAM:PF01419 | PFscan:PS51752 |
| SMART:SM00915 | EnsemblPlantsGene:SORBI_3009G190700 | SUPFAM:SSF51101 | unigene:Sbi.3030 | UniParc:UPI0001A88AE7 | RefSeq:XP_002440040.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:54272864..54277353
Molecular Weight (calculated)
64740.7 Da
IEP (calculated)
8.170
GRAVY (calculated)
-0.388
Length
594 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIKSINGKS PIVVGPWGGT GGYPWDDGVY STIRQIVIGH GAAIDSIRIE YDLKGRSVWS ETRGGTDGGS ETDKVKLDFP DEVLVSVSGH YGSVCGTPVI
101: IRSLTFQSNS STYGPFGTED GTPFSLPVSS GKIIGFHGRS GSYLNSIGFY LKQVHFPNPM NSPASPMSLP SSQSRNGYGF SGDTGPDMVL AVRDRGDSYA
201: VYASNQPKQQ YTNPSPDYND GALWNKMVSF PSYYGDTGAA AMSSPQTYGP WGGSGGTIFD DGVYTGVWQI NLTRAVGISS IKVLYDRNGQ AVWGNKHGFS
301: GGVIPDKIIF DFPSEVLTHI TGFYDSAIIM GPTVVRSLTF HTNKRTYGPY GDEYGTYFST SFTNGRIVGF HGREGWYIDG IGVHVQEGKL ASQRFVSRPK
401: TATSPSVQYN MLAQAPSNTY TDNEVAYGMV KEPVPMGPGP WGGEGGRAWD DGVYTGVKQI YIMRGAFIGS IQIEYDRSGH SIWSSRHGNS GHITHRVKLD
501: FPHEVLTCVY GYYNTNREDG PRVLRSLTFI TNRGKYGPFG DEFGSYFSSA TTEGKVVGFH GRSGQHLDAI GVHMQHWLGD RRPAPKYVLS KYLF
101: IRSLTFQSNS STYGPFGTED GTPFSLPVSS GKIIGFHGRS GSYLNSIGFY LKQVHFPNPM NSPASPMSLP SSQSRNGYGF SGDTGPDMVL AVRDRGDSYA
201: VYASNQPKQQ YTNPSPDYND GALWNKMVSF PSYYGDTGAA AMSSPQTYGP WGGSGGTIFD DGVYTGVWQI NLTRAVGISS IKVLYDRNGQ AVWGNKHGFS
301: GGVIPDKIIF DFPSEVLTHI TGFYDSAIIM GPTVVRSLTF HTNKRTYGPY GDEYGTYFST SFTNGRIVGF HGREGWYIDG IGVHVQEGKL ASQRFVSRPK
401: TATSPSVQYN MLAQAPSNTY TDNEVAYGMV KEPVPMGPGP WGGEGGRAWD DGVYTGVKQI YIMRGAFIGS IQIEYDRSGH SIWSSRHGNS GHITHRVKLD
501: FPHEVLTCVY GYYNTNREDG PRVLRSLTFI TNRGKYGPFG DEFGSYFSSA TTEGKVVGFH GRSGQHLDAI GVHMQHWLGD RRPAPKYVLS KYLF
001: MVLTSSYSVE GKPASLGPWG GQSGHAWDDG MYTTVKQIII AHGSGIDSIQ IEYDKNGSSV WSEKRGGKGG KKFDKVKFDY PHEYLISVNG TYGSFDVWGT
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F
Arabidopsis Description
JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [plastid,cytoskeleton,cytosol]
SUBAcon: [plastid,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.