Factsheet for HORVU1Hr1G075520.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
plasma membrane 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G327100.1	Wheat	cytosol	95.73	95.57
TraesCS1A01G325500.1	Wheat	cytosol	94.37	92.94
TraesCS1B01G338600.1	Wheat	cytosol	94.88	91.75
Os05t0508400-01	Rice	cytoskeleton, cytosol, plastid	77.65	75.33
OQU78268	Sorghum	cytosol, nucleus, plastid	75.94	74.92
Zm00001d038651_P004	Maize	cytosol, nucleus, plastid	75.77	74.5
HORVU3Hr1G075960.3	Barley	plastid	41.3	53.9
KRG98276	Soybean	cytosol	48.12	47.88
KRH30293	Soybean	cytosol	47.61	47.37
AT1G19715.3	Thale cress	cytoskeleton, cytosol, plastid	45.9	44.76
KRH72685	Soybean	peroxisome	41.47	44.42
Bra016496.1-P	Field mustard	cytosol	43.17	43.4
Bra025760.1-P	Field mustard	extracellular	44.88	43.33
VIT_18s0001g13210.t01	Wine grape	cytosol	49.15	42.99
CDY63700	Canola	cytosol	42.83	42.91
Solyc10g078600.1.1	Tomato	cytosol	46.08	41.47
PGSC0003DMT400021541	Potato	cytosol	46.25	41.44
CDX96652	Canola	extracellular	43.0	40.98
HORVU7Hr1G109850.2	Barley	cytosol	9.73	35.62
HORVU7Hr1G052850.1	Barley	cytosol	8.87	33.55
HORVU1Hr1G079360.2	Barley	extracellular	12.29	27.48

Protein Annotations

EMBL:AK354387	EnsemblPlants:HORVU1Hr1G075520.2	EnsemblPlantsGene:HORVU1Hr1G075520	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0002004513
UniProt:F2CRY5	MapMan:35.1	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CRY5]

Coordinates

chrchr1H:-:511072912..511076165

Molecular Weight (calculated)

63441.1 Da

IEP (calculated)

7.154

GRAVY (calculated)

-0.394

Length

586 amino acids

Sequence
(BLAST)

001: MSIMSADGKS PIVVGPWGGT GGYPWDDGVY STVCQIMITH GAAVDSIRIQ YDLKGHSVWS QTHGSTEDGS ETDKVKLDVP GEILLSVSGY YGSVCGSPVI
101: IRSLTFQSNR SKYGPFGTED GTPFSLPVSS GKIIGFHGRS GSYLNSIGFY LKQVHVPIPN PSSYPALPQL PTPAYNRNGY TVDEVGDEHD MALAVRDRSD
201: SYAVYGSAYP KQQYAHPSPD YHDGAIMNKM VSYPSSYRAA MSGPETHGPW GGSGGTIFDD GVYTGVWQIN LTRAVGVTSM KVLYDRHGQA VWGNKHGFSS
301: GVPPDKIAFD FPSEVLTHIT GYYGPTIIMG PTAVRSLTFH TNRRRYGPYG DEYGTYFSTS FADGRVVGFH GREGWYIDGI GVHVQQGRVP SSLRAASRSP
401: SPAPRYDPGD VDEEVPYAAM VMEPVAAGPG PWGGEGGRAW DDGVYAGVNQ VYVTRGALIG SIQIQYDRGD RSEWSARHGT SGHITHRVKL DAPHEVLTCV
501: RGYYNADPAE GPRALRSITF VSNRGRYGPF GDEVGTYFSS PATAGGKVVG FHGRSGQHLD AIGVHMQHWQ GDRRAAPKFV LSKYLF

Best Arabidopsis Sequence Match ( AT1G19715.1 )
(BLAST)

001: MSVEGKPASL GPWGGQSGHA WDDGMYTTVK QIIIAHGSGI DSIQIEYDKN GSSVWSEKRG GKGGKKFDKV KFDYPHEYLI SVNGTYGSFD VWGTICVRSL
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF

Arabidopsis Description

JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.