Factsheet for HORVU3Hr1G075960.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
cytosol 2
extracellular 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G310300.1	Wheat	plastid	97.1	96.67
TraesCS3B01G344800.1	Wheat	plastid	96.88	96.45
TraesCS3A01G321000.1	Wheat	plastid	96.66	96.23
KXG33492	Sorghum	cytosol	77.06	58.64
Os01t0775500-01	Rice	cytosol, mitochondrion	32.96	42.41
HORVU1Hr1G075520.2	Barley	cytosol	53.9	41.3
Zm00001d012640_P010	Maize	endoplasmic reticulum	61.92	38.99
KRG98276	Soybean	cytosol	46.1	35.14
KRH30293	Soybean	cytosol	45.21	34.47
AT1G19715.3	Thale cress	cytoskeleton, cytosol, plastid	44.1	32.95
CDY63700	Canola	cytosol	42.54	32.65
Bra025760.1-P	Field mustard	extracellular	44.1	32.62
Bra016496.1-P	Field mustard	cytosol	42.09	32.42
PGSC0003DMT400021541	Potato	cytosol	46.33	31.8
VIT_18s0001g13210.t01	Wine grape	cytosol	47.44	31.79
Solyc10g078600.1.1	Tomato	cytosol	45.88	31.64
CDX96652	Canola	extracellular	42.09	30.73
KRH72685	Soybean	peroxisome	36.97	30.35
OQU87644	Sorghum	cytosol	11.8	22.27
HORVU7Hr1G109850.2	Barley	cytosol	6.01	16.88
HORVU7Hr1G052850.1	Barley	cytosol	4.9	14.19
HORVU1Hr1G079360.2	Barley	extracellular	6.68	11.45
Os01t0775600-01	Rice	cytosol	0.45	0.93

Protein Annotations

EnsemblPlants:HORVU3Hr1G075960.3	EnsemblPlantsGene:HORVU3Hr1G075960	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PFAM:PF01419
PFscan:PS51752	SEG:seg	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0002960793	UniProt:M0YN17
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:567163958..567167067

Molecular Weight (calculated)

48417.4 Da

IEP (calculated)

9.474

GRAVY (calculated)

-0.306

Length

449 amino acids

Sequence
(BLAST)

001: MSLASLSGKD PNASSAPSAL RSITRSVDRN GHRYADGNEM VLAKEQNPNG SRIATLSNKM VSFPSFISDN GTMTISTPVR FGPWGGTGGT IFDDGIFTGV
101: RQINITRGLG ISSMKVLYDR NGQAIWGDKR GSSGAARPEK IIFDFPTEIL THVTGYFGPT MIMGPTAIKS ITFHTTKKSH GPFGDETGTF FSSCLTEGRI
201: VGFHGRGAWY VDSIGVHVLE GKVLSEKSAG TTPLGDMLAL PMREIGDEVT YGVVKEPIPI GPGPWGGEGG KPWDDGVYTG IKQIYVTRDD FIASIQIEYD
301: RSGQSVWSTR HGNGGQITHR IKLDYPHEVL TCVYGYYNTC VGEGPRVLRS ITVVSSRGKY GPFGDEVGTY FTSATTQGKV VGFHGRSAMY LDAIGVHMQH
401: WLGDRNTAIA ARPKASSIPK IVGPNPKSTG SDNPRAGSGT KYYVSRYLF

Best Arabidopsis Sequence Match ( AT1G19715.1 )
(BLAST)

001: MSVEGKPASL GPWGGQSGHA WDDGMYTTVK QIIIAHGSGI DSIQIEYDKN GSSVWSEKRG GKGGKKFDKV KFDYPHEYLI SVNGTYGSFD VWGTICVRSL
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF

Arabidopsis Description

JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.