Factsheet for Zm00001d012640_P010

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
cytosol 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0775600-01	Rice	cytosol	26.23	86.57
HORVU3Hr1G075960.3	Barley	plastid	38.99	61.92
TraesCS3D01G310300.1	Wheat	plastid	38.85	61.42
TraesCS3B01G344800.1	Wheat	plastid	38.85	61.42
TraesCS3A01G321000.1	Wheat	plastid	38.85	61.42
KXG33492	Sorghum	cytosol	43.76	52.88
Zm00001d038651_P004	Maize	cytosol, nucleus, plastid	33.1	39.6
KRG98276	Soybean	cytosol	27.21	32.94
KRH30293	Soybean	cytosol	27.07	32.77
Os01t0775500-01	Rice	cytosol, mitochondrion	15.43	31.52
Bra016496.1-P	Field mustard	cytosol	25.67	31.39
Bra025760.1-P	Field mustard	extracellular	26.65	31.3
CDY63700	Canola	cytosol	25.67	31.28
AT1G19715.3	Thale cress	cytoskeleton, cytosol, plastid	26.37	31.28
CDX96652	Canola	extracellular	26.23	30.41
VIT_18s0001g13210.t01	Wine grape	cytosol	28.47	30.3
Solyc10g078600.1.1	Tomato	cytosol	27.07	29.65
PGSC0003DMT400021541	Potato	cytosol	27.07	29.51
KRH72685	Soybean	peroxisome	21.6	28.15
Zm00001d009416_P001	Maize	cytosol, mitochondrion	5.05	15.58
OQU87644	Sorghum	cytosol	3.65	10.92

Protein Annotations

EntrezGene:100276682	Gene3D:2.100.10.30	MapMan:35.1	UniProt:A0A1D6GAF1	ProteinID:AQL00080.1	InterPro:CRA_dom
InterPro:CTLH/CRA	InterPro:CTLH_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0030246	InterPro:IPR001229	InterPro:IPR006594	InterPro:IPR006595
InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	InterPro:LisH	PFAM:PF01419
PFAM:PF10607	PFscan:PS50896	PFscan:PS50897	PFscan:PS51752	PANTHER:PTHR12864	PANTHER:PTHR12864:SF21
SMART:SM00667	SMART:SM00668	SMART:SM00757	SMART:SM00915	SUPFAM:SSF51101	TMHMM:TMhelix
UniParc:UPI00084562E3	EnsemblPlantsGene:Zm00001d012640	EnsemblPlants:Zm00001d012640_P010	EnsemblPlants:Zm00001d012640_T010	SEG:seg	:

Description

Jacalin-related lectin 3

Coordinates

chr8:+:177653483..177663257

Molecular Weight (calculated)

79262.5 Da

IEP (calculated)

7.223

GRAVY (calculated)

-0.175

Length

713 amino acids

Sequence
(BLAST)

001: MPLNMWLIWP YGSALSVDPT IYIYGIVMLY ANCTHSFMFY PLLSFSIKGI NYYCHLLDNL INANYTIIFV KLQHATDINF SLLQSVSDND VRNIVLSYLM
101: HNCFKETAEA FLSSTGLNLP VDYSVDVDKR KAIFNFVLEG NALKAIELTE EMAPNLLEND MDLHFDLLSL HFIELVRSKK FTEALDFGQK KLTSFQKVTK
201: YIEKLEDFMA LLAYEEPEKS PMFHLLSPEH RQNVAEGLNR AVLAHANLPA YSSLERVVQQ ATVVRQYLQQ EVGKDSYPPF SLKAFLSNFY ADSTGTSMSM
301: SISIPVRFGP WGGNSGTIFD DGIYTGVRQI NLTRGLVGIS SMKVLYDRNG QAVWGDKRGV SGGSTRAQKV VFDFPSEILT HITGYFGSTT ATMKMKMGPT
401: VIRSLTFHTT RKSHGPFGGD EQHGTFFSSC LADGRIVGFH GRAGWYIDSV GVHVLEGKVL SQQRDDETRC SLALAARERE AGDEVAPATT TTTYGVVKEP
501: VPIGPGPWGG DGGKPWDDGV YTGVRQMYIT RTDDFIGSVQ MEYDRSGKSV WSTKHGNGGQ QQITITHRIK LDYPHEVLTC VYGYYNACVE EGPRVLRSLT
601: LVSSRGRYGP FGDEVGAYFT SATTEGKVVG FHGRCGLYLD AIGVHMQHWL GVGDARTARA SAPSKYYISR PGHIDWGLRC SVLYRSKTQV AGRSGVVDLA
701: DFEKSKSTTQ LFA

Best Arabidopsis Sequence Match ( AT1G06060.1 )
(BLAST)

001: MDPRQFEHTV VADNDIHSIV MSYLLHNCFN ETADSLASST GVKQPAIDRD NMERRKQIIH FILERKALKA FELTEQLAQD LLEKNKDLQF DLLCLHFVEL
101: ICAGNCTEAL KFGKTRLAPF GKVKKYVEKL EDVMALLAYE DPEKSPMFHL LSSEYRQQVA DNLNRTILEH TNHPSYTPME RIIQQVTVVR QYLTEENGKD
201: AFPPFSLKDS LKG

Arabidopsis Description

At1g06060 [Source:UniProtKB/TrEMBL;Acc:Q9LNE1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.