Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU78369 | Sorghum | mitochondrion | 73.59 | 82.13 |
| TraesCS1D01G368600.1 | Wheat | mitochondrion | 59.31 | 62.27 |
| TraesCS1B01G380700.1 | Wheat | mitochondrion | 58.44 | 61.36 |
| TraesCS1A01G363600.1 | Wheat | cytosol | 58.44 | 61.36 |
| Os05t0541800-01 | Rice | cytosol, mitochondrion, plastid | 21.64 | 53.76 |
| HORVU1Hr1G079360.2 | Barley | extracellular | 58.44 | 51.53 |
| AT1G73040.1 | Thale cress | cytosol | 33.77 | 44.32 |
| Bra008068.1-P | Field mustard | cytosol | 33.33 | 43.75 |
| PGSC0003DMT400006686 | Potato | cytosol | 37.23 | 42.79 |
| GSMUA_Achr1P05130_001 | Banana | cytosol | 36.36 | 42.64 |
| Solyc03g121300.2.1 | Tomato | cytosol | 36.8 | 42.29 |
| KRH23344 | Soybean | cytosol | 32.9 | 41.99 |
| PGSC0003DMT400006433 | Potato | cytosol, nucleus, peroxisome | 24.24 | 41.18 |
| VIT_09s0002g02610.t01 | Wine grape | cytosol | 36.36 | 40.0 |
| VIT_09s0002g02620.t01 | Wine grape | cytosol | 34.2 | 38.54 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 32.9 | 33.04 |
| CDX82115 | Canola | extracellular | 33.33 | 30.8 |
| Os01t0706800-00 | Rice | mitochondrion | 31.6 | 27.24 |
| Zm00001d038651_P004 | Maize | cytosol, nucleus, plastid | 34.63 | 13.42 |
| Zm00001d012640_P010 | Maize | endoplasmic reticulum | 15.58 | 5.05 |
Protein Annotations
| EnsemblPlants:Zm00001d009416_P001 | EnsemblPlants:Zm00001d009416_T001 | EnsemblPlantsGene:Zm00001d009416 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PANTHER:PTHR45172 |
| PFAM:PF01419 | PFscan:PS51752 | ProteinID:AQK91839.1 | SEG:seg | SMART:SM00915 | SUPFAM:SSF51101 |
| UniParc:UPI0004DEC7CE | UniProt:A0A1D6FJA2 | MapMan:35.1 | : | : | : |
Description
Jacalin-related lectin 19
Coordinates
chr8:+:63478425..63479120
Molecular Weight (calculated)
24985.7 Da
IEP (calculated)
9.647
GRAVY (calculated)
-0.364
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVSKKKLIK VGPWGGAGGH PWDDGGYSGI RSITMSYDRF MESISVEYDR DGMPVTGERH GGAAASHTTQ ARPPPNQSPP SVTISDTAPS AGWFLNRARV
101: RTQIKLGYPD EYLTTVSGHY APIAPGGSPV IRSLAFRTNQ GAYGPFGVAE GTPFEFPVDG GVIVGFCGRS GWQLDAVGLY VAPLRPETVY DRVHKLGLTA
201: YRAVWQRIGS QQQQQEPVKL LNGNAQITHK M
101: RTQIKLGYPD EYLTTVSGHY APIAPGGSPV IRSLAFRTNQ GAYGPFGVAE GTPFEFPVDG GVIVGFCGRS GWQLDAVGLY VAPLRPETVY DRVHKLGLTA
201: YRAVWQRIGS QQQQQEPVKL LNGNAQITHK M
001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
Arabidopsis Description
JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.