Factsheet for TraesCS1D01G368600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G380700.1	Wheat	mitochondrion	97.27	97.27
TraesCS1A01G363600.1	Wheat	cytosol	96.36	96.36
HORVU1Hr1G079360.2	Barley	extracellular	95.45	80.15
Os05t0541800-01	Rice	cytosol, mitochondrion, plastid	30.45	72.04
OQU78369	Sorghum	mitochondrion	67.73	71.98
Zm00001d009416_P001	Maize	cytosol, mitochondrion	62.27	59.31
Bra008068.1-P	Field mustard	cytosol	36.82	46.02
AT1G73040.1	Thale cress	cytosol	35.91	44.89
KRH23344	Soybean	cytosol	35.45	43.09
PGSC0003DMT400006686	Potato	cytosol	38.18	41.79
Solyc03g121300.2.1	Tomato	cytosol	38.18	41.79
GSMUA_Achr1P05130_001	Banana	cytosol	37.27	41.62
PGSC0003DMT400006433	Potato	cytosol, nucleus, peroxisome	24.55	39.71
VIT_09s0002g02610.t01	Wine grape	cytosol	36.82	38.57
VIT_09s0002g02620.t01	Wine grape	cytosol	34.09	36.59
TraesCS3D01G028700.1	Wheat	cytosol	23.18	36.17
CDY48032	Canola	cytosol, extracellular, nucleus	36.36	34.78
TraesCS3D01G030000.1	Wheat	cytosol	25.91	34.34
TraesCS7D01G254500.1	Wheat	cytosol	23.64	33.55
CDX82115	Canola	extracellular	36.82	32.4
Os01t0706800-00	Rice	mitochondrion	32.73	26.87
TraesCS3D01G029200.1	Wheat	cytosol	24.55	22.98
TraesCS1D01G367900.1	Wheat	cytosol	25.0	17.19
TraesCS1D01G327100.1	Wheat	cytosol	32.27	12.1
TraesCS3D01G310300.1	Wheat	plastid	13.64	6.65

Protein Annotations

EnsemblPlants:TraesCS1D01G368600.1	EnsemblPlantsGene:TraesCS1D01G368600	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR45172
PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915	SUPFAM:SSF51101	TIGR:cd09612
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:447918452..447919451

Molecular Weight (calculated)

23648.2 Da

IEP (calculated)

9.754

GRAVY (calculated)

-0.419

Length

220 amino acids

Sequence
(BLAST)

001: MQQQLPPPPQ RKMVASKKLM KVGPWGGTGG NPWDDGGHTG IRGVTLSYDH RCVVSIAVEY DRSGLAVPGE RHGGAGGNHT TQIKLSFPDE HLTAVSGRYG
101: AVAPGGSPVI RSLAFRTERA AYGPFGAAEG TPFEFAVEGG VIVGFCGRSG WQLDAVGMYV APLRPEKLYD KVHHLGLMAY RSVMHRLGPA PAPPQDELPE
201: ARVQHQRQNG SVVQTSRKNY

Best Arabidopsis Sequence Match ( AT1G73040.1 )
(BLAST)

001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA

Arabidopsis Description

JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.