Factsheet for Bra008068.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
mitochondrion 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	cytosol, extracellular, mitochondrion, nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G73040.1	Thale cress	cytosol	89.2	89.2
CDY48032	Canola	cytosol, extracellular, nucleus	98.3	75.22
CDX82115	Canola	extracellular	98.3	69.2
KRH23344	Soybean	cytosol	57.95	56.35
VIT_09s0002g02610.t01	Wine grape	cytosol	62.5	52.38
VIT_09s0002g02620.t01	Wine grape	cytosol	56.25	48.29
GSMUA_Achr1P05130_001	Banana	cytosol	53.98	48.22
Solyc03g121300.2.1	Tomato	cytosol	53.98	47.26
PGSC0003DMT400006686	Potato	cytosol	53.98	47.26
Os05t0541800-01	Rice	cytosol, mitochondrion, plastid	24.43	46.24
PGSC0003DMT400006433	Potato	cytosol, nucleus, peroxisome	33.52	43.38
OQU78369	Sorghum	mitochondrion	46.59	39.61
TraesCS1D01G368600.1	Wheat	mitochondrion	46.02	36.82
TraesCS1A01G363600.1	Wheat	cytosol	46.02	36.82
TraesCS1B01G380700.1	Wheat	mitochondrion	44.89	35.91
Zm00001d009416_P001	Maize	cytosol, mitochondrion	43.75	33.33
KXG33219	Sorghum	mitochondrion	37.5	31.73
Os04t0330200-01	Rice	mitochondrion	32.39	30.16
HORVU1Hr1G079360.2	Barley	extracellular	44.89	30.15
Os04t0200400-00	Rice	mitochondrion	31.82	29.63
Os01t0706800-00	Rice	mitochondrion	26.7	17.54
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	15.34	14.44
Bra016496.1-P	Field mustard	cytosol	42.61	12.86
Bra018942.1-P	Field mustard	cytosol	27.27	12.63
Bra025760.1-P	Field mustard	extracellular	42.05	12.19
Bra017083.1-P	Field mustard	cytosol	23.86	11.51
Bra021179.1-P	Field mustard	cytosol	29.55	11.5
Bra018941.1-P	Field mustard	cytosol	27.27	11.09
Bra014306.1-P	Field mustard	cytosol	23.86	10.24
Bra021176.1-P	Field mustard	cytosol	26.14	9.85
Bra001631.1-P	Field mustard	cytosol	16.48	9.76
Bra017082.1-P	Field mustard	cytosol	24.43	9.73
Bra005053.1-P	Field mustard	cytosol	24.43	9.41
Bra021177.1-P	Field mustard	nucleus	15.91	9.4
Bra000129.1-P	Field mustard	cytosol	23.86	9.25
Bra022161.1-P	Field mustard	cytosol	23.3	9.11
Bra018945.1-P	Field mustard	cytosol	26.14	8.73
Bra001632.1-P	Field mustard	cytosol	11.93	8.61
Bra026177.1-P	Field mustard	cytosol	14.2	8.53
Bra027095.1-P	Field mustard	cytosol	28.41	8.5
Bra030443.1-P	Field mustard	cytosol	31.82	7.55
Bra022160.1-P	Field mustard	cytosol	28.41	7.42
Bra013639.1-P	Field mustard	cytosol	19.32	7.07
Bra013637.1-P	Field mustard	cytosol	18.18	6.84
Bra023885.1-P	Field mustard	nucleus	20.45	6.67
Bra014308.1-P	Field mustard	cytosol	27.27	6.55
Bra002818.1-P	Field mustard	cytosol	26.7	5.49
Bra014309.1-P	Field mustard	cytosol	26.14	5.39
Bra014307.1-P	Field mustard	cytosol	25.0	5.03
Bra014231.1-P	Field mustard	cytosol	28.41	4.78
Bra017017.1-P	Field mustard	cytosol	9.09	4.68
Bra030402.1-P	Field mustard	cytosol	25.57	4.2
Bra018940.1-P	Field mustard	cytosol	27.27	4.07

Protein Annotations

EnsemblPlants:Bra008068.1	EnsemblPlants:Bra008068.1-P	EnsemblPlantsGene:Bra008068	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PANTHER:PTHR45172	PFAM:PF01419	PFscan:PS51752	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI00025471D4
UniProt:M4CV23	MapMan:35.1	:	:	:	:

Description

AT1G73040 (E=7e-095) | jacalin lectin family protein

Coordinates

chrA02:-:12988003..12988611

Molecular Weight (calculated)

19616.4 Da

IEP (calculated)

9.863

GRAVY (calculated)

-0.495

Length

176 amino acids

Sequence
(BLAST)

001: MDQQQQGDKN LSVFVGPWGG NGGTAWDDGI YHGVREIKLV YDHCIDSISL VYDKNGKAVR SEKHGGQGGN KTTEIKLQYP EEYLIGVSGY YCPVVHSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFSFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKV IHKLRKKIHW FTRMVA

Best Arabidopsis Sequence Match ( AT1G73040.1 )
(BLAST)

001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA

Arabidopsis Description

JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.