Factsheet for Os04t0200400-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 2
plasma membrane 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0330200-01	Rice	mitochondrion	95.24	95.24
Os05t0541800-01	Rice	cytosol, mitochondrion, plastid	15.87	32.26
Bra008068.1-P	Field mustard	cytosol	29.63	31.82
AT1G73040.1	Thale cress	cytosol	29.1	31.25
KRH23344	Soybean	cytosol	29.63	30.94
PGSC0003DMT400006686	Potato	cytosol	32.8	30.85
Solyc03g121300.2.1	Tomato	cytosol	32.28	30.35
GSMUA_Achr1P05130_001	Banana	cytosol	30.16	28.93
PGSC0003DMT400006433	Potato	cytosol, nucleus, peroxisome	20.63	28.68
VIT_09s0002g02610.t01	Wine grape	cytosol	30.69	27.62
VIT_09s0002g02620.t01	Wine grape	cytosol	29.63	27.32
CDY48032	Canola	cytosol, extracellular, nucleus	29.1	23.91
CDX82115	Canola	extracellular	29.1	22.0
Os01t0706800-00	Rice	mitochondrion	19.58	13.81
Os01t0775500-01	Rice	cytosol, mitochondrion	19.58	10.6
Os05t0508400-01	Rice	cytoskeleton, cytosol, plastid	32.8	10.26
Os01t0775600-01	Rice	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Os04t0200400-00	EnsemblPlantsGene:Os04g0200400	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR45172
PFAM:PF01419	PFscan:PS51752	ProteinID:BAS88064.1	SEG:seg	SMART:SM00915	SUPFAM:SSF51101
UniParc:UPI000393A995	UniProt:A0A0P0W791	MapMan:35.2	:	:	:

Description

Similar to OSIGBa0113K06.9 protein. (Os04t0200400-00)

Coordinates

chr4:-:6834186..6838247

Molecular Weight (calculated)

21197.9 Da

IEP (calculated)

6.880

GRAVY (calculated)

-0.571

Length

189 amino acids

Sequence
(BLAST)

001: MVLTLQRVKI GPWGGTGGHA WDEGGHGASA GGYTGVRRMS IGSSWCVSSM LFEYDDNGKR VKGTLQGEGG NGIPEEELDF HGEVLTHMCG YHDNHLIRWL
101: QFRSNRNRTF GPYGNLGEDR AGWTRFEVSM EHSGSIVGFC GRSGNFTDAI GVYVAVWNPE RFYDSMRRQG VRVYRASPLR MDLRQIEEE

Best Arabidopsis Sequence Match ( AT1G52030.3 )
(BLAST)

001: MSEKVGAMGG NKGGAFDDGV FDGVKKVIVG KDFNNVTYIK VEYEKDGKFE IREHGTNRGQ LKEFSVDYPN EYITAVGGSY DTVFGYGSAL IKSLLFKTSY
101: GRTSPILGHT TLLGNPAGKE FMLESKYGGK LLGFHGRSGE ALDAIGPHFF AVNSSLKHFK PQGGNGGSAW DDGAFDGVRK VLVGRNGKFV SYVRFEYAKG
201: ERMVPHAHGK RQEAPQEFVV DYPNEHITSV EGTIDGYLSS LKFTTSKGRT SPVFGNVVGS KFVFEETSFK LVGFCGRSGE AIDALGAHFA PLPAPTPAPA
301: PAPAPAPAPA PSPAPASAPV PAPAPTPAPA PAPPNKVEAL GGNGGTIFDD GAFDHVRKVY IGQGDSGVAY VKFEYRKDGK RETREHGKMT VLGTEEFEVE
401: SDDYITSIEV SVDNVFGFKS EIVTSLVFKT FKGITSQPFG METEKKLELK DGKGGKLVGF HGKASDVLYA LGAYFAPTTN STTPSTPSTS KKLQARGGNG
501: GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DRHGKQTLLG TETVLSSLQS VSSFTQNLIS

Arabidopsis Description

F-ATMBPMyrosinase-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.