Factsheet for Os04t0330200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0200400-00	Rice	mitochondrion	95.24	95.24
Os05t0541800-01	Rice	cytosol, mitochondrion, plastid	16.4	33.33
Bra008068.1-P	Field mustard	cytosol	30.16	32.39
KRH23344	Soybean	cytosol	30.69	32.04
AT1G73040.1	Thale cress	cytosol	29.63	31.82
Solyc03g121300.2.1	Tomato	cytosol	32.8	30.85
PGSC0003DMT400006686	Potato	cytosol	32.8	30.85
GSMUA_Achr1P05130_001	Banana	cytosol	30.16	28.93
VIT_09s0002g02620.t01	Wine grape	cytosol	30.69	28.29
PGSC0003DMT400006433	Potato	cytosol, nucleus, peroxisome	20.11	27.94
VIT_09s0002g02610.t01	Wine grape	cytosol	30.69	27.62
CDY48032	Canola	cytosol, extracellular, nucleus	29.63	24.35
CDX82115	Canola	extracellular	30.16	22.8
Os01t0706800-00	Rice	mitochondrion	18.52	13.06
Os01t0775500-01	Rice	cytosol, mitochondrion	20.11	10.89
Os05t0508400-01	Rice	cytoskeleton, cytosol, plastid	33.33	10.43
Os01t0775600-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.2	ProteinID:BAF14392.1	ProteinID:BAS88613.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0016787
GO:GO:0019538	GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant
InterPro:Jacalin-like_lectin_dom_sf	EnsemblPlantsGene:Os04g0330200	EnsemblPlants:Os04t0330200-01	PFAM:PF01419	PFscan:PS51752	PANTHER:PTHR45172
UniProt:Q0JE45	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0000DD8FFF	:	:

Description

Mannose-binding lectin domain containing protein. (Os04t0330200-01)

Coordinates

chr4:-:15342893..15344478

Molecular Weight (calculated)

21479.2 Da

IEP (calculated)

6.304

GRAVY (calculated)

-0.572

Length

189 amino acids

Sequence
(BLAST)

001: MVLTLQRVKI GPWGGTGGHA WDEGGHGASA GSYTGVRRMS IGSSWCVSSM LFEYDDNGKR VKGTLHGERD NGIPEEELDF HGEVLTHMCG YHDNHLIRWL
101: QFRSNRNRTF GPYGNLLEDQ AGWTRFEVSM EHSGSIVGFC GRSDDFVDAI GVYVAVWNPE RFYDSMRRQG VRVYRASPLR MDLRQIEEE

Best Arabidopsis Sequence Match ( AT1G19715.2 )
(BLAST)

001: MYTTVKQIII AHGSGIDSIQ IEYDKNGSSV WSEKRGGKGG KKFDKVKFDY PHEYLISVNG TYGSFDVWGT ICVRSLTFES NRRKYGPFGV DSGTFFALPK
101: SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE
201: KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI
301: KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH NNSGTAQIEN SPWANKLVLA ANGHGEEVDR
401: GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT HRIKFEYPDE SITCISGYYG PLNNSDRYNV
501: VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL F

Arabidopsis Description

JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.