Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 2
- cytosol 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G73040.1 | Thale cress | cytosol | 57.46 | 59.09 |
| Bra008068.1-P | Field mustard | cytosol | 56.35 | 57.95 |
| GSMUA_Achr1P05130_001 | Banana | cytosol | 59.67 | 54.82 |
| VIT_09s0002g02610.t01 | Wine grape | cytosol | 61.88 | 53.33 |
| Solyc03g121300.2.1 | Tomato | cytosol | 59.12 | 53.23 |
| PGSC0003DMT400006686 | Potato | cytosol | 59.12 | 53.23 |
| VIT_09s0002g02620.t01 | Wine grape | cytosol | 52.49 | 46.34 |
| PGSC0003DMT400006433 | Potato | cytosol, nucleus, peroxisome | 34.25 | 45.59 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 55.8 | 43.91 |
| Os05t0541800-01 | Rice | cytosol, mitochondrion, plastid | 22.1 | 43.01 |
| CDX82115 | Canola | extracellular | 55.8 | 40.4 |
| OQU78369 | Sorghum | mitochondrion | 41.44 | 36.23 |
| TraesCS1D01G368600.1 | Wheat | mitochondrion | 43.09 | 35.45 |
| TraesCS1B01G380700.1 | Wheat | mitochondrion | 43.09 | 35.45 |
| TraesCS1A01G363600.1 | Wheat | cytosol | 42.54 | 35.0 |
| Zm00001d009416_P001 | Maize | cytosol, mitochondrion | 41.99 | 32.9 |
| KXG33219 | Sorghum | mitochondrion | 37.02 | 32.21 |
| Os04t0330200-01 | Rice | mitochondrion | 32.04 | 30.69 |
| HORVU1Hr1G079360.2 | Barley | extracellular | 43.09 | 29.77 |
| Os04t0200400-00 | Rice | mitochondrion | 30.94 | 29.63 |
| Os01t0706800-00 | Rice | mitochondrion | 27.62 | 18.66 |
| KRH72685 | Soybean | peroxisome | 43.65 | 14.44 |
| KRH30293 | Soybean | cytosol | 43.09 | 13.24 |
| KRG98276 | Soybean | cytosol | 43.09 | 13.24 |
Protein Annotations
| EntrezGene:100306436 | Gene3D:2.100.10.30 | MapMan:35.1 | EMBL:ACUP02008462 | EnsemblPlantsGene:GLYMA_13G352300 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0030246 | UniProt:I1M5E3 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom |
| InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | EnsemblPlants:KRH23344 | ProteinID:KRH23344 | ProteinID:KRH23344.1 | PFAM:PF01419 |
| PFscan:PS51752 | PANTHER:PTHR45172 | SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI000295E1EB | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:-:44119294..44120791
Molecular Weight (calculated)
19744.5 Da
IEP (calculated)
9.670
GRAVY (calculated)
-0.298
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKSRKKNV IVGPWGGNGG NSWDDGIFTG VREIKLVYGH CIDSIQVVYD RNGKPFTAEK HGGVGGNKTA EIKLQFPDEF LVSVSGHYCP VVRGGTPVIR
101: SLTFKSNHRT FGPYGVEEGT LFTFSIDGGC VVGFKGRGDW YLDAIAFTLC NTRSKSLFQK VQRSLLWLTT TAPKSTSSKD G
101: SLTFKSNHRT FGPYGVEEGT LFTFSIDGGC VVGFKGRGDW YLDAIAFTLC NTRSKSLFQK VQRSLLWLTT TAPKSTSSKD G
001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
Arabidopsis Description
JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.