Factsheet for TraesCS1A01G363600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G368600.1	Wheat	mitochondrion	96.36	96.36
TraesCS1B01G380700.1	Wheat	mitochondrion	95.45	95.45
HORVU1Hr1G079360.2	Barley	extracellular	92.73	77.86
OQU78369	Sorghum	mitochondrion	67.27	71.5
Os05t0541800-01	Rice	cytosol, mitochondrion, plastid	30.0	70.97
Zm00001d009416_P001	Maize	cytosol, mitochondrion	61.36	58.44
Bra008068.1-P	Field mustard	cytosol	36.82	46.02
AT1G73040.1	Thale cress	cytosol	35.91	44.89
KRH23344	Soybean	cytosol	35.0	42.54
GSMUA_Achr1P05130_001	Banana	cytosol	36.82	41.12
PGSC0003DMT400006686	Potato	cytosol	37.27	40.8
Solyc03g121300.2.1	Tomato	cytosol	37.27	40.8
TraesCS6A01G105700.1	Wheat	cytosol	24.55	38.85
PGSC0003DMT400006433	Potato	cytosol, nucleus, peroxisome	23.64	38.24
VIT_09s0002g02610.t01	Wine grape	cytosol	36.36	38.1
VIT_09s0002g02620.t01	Wine grape	cytosol	33.64	36.1
CDY48032	Canola	cytosol, extracellular, nucleus	36.36	34.78
TraesCS7A01G256100.1	Wheat	cytosol	23.64	33.55
CDX82115	Canola	extracellular	36.82	32.4
TraesCS3A01G131600.1	Wheat	cytosol	22.73	27.03
Os01t0706800-00	Rice	mitochondrion	31.82	26.12
TraesCS1A01G325500.1	Wheat	cytosol	31.82	11.76
TraesCS3A01G321000.1	Wheat	plastid	13.18	6.43

Protein Annotations

EnsemblPlants:TraesCS1A01G363600.1	EnsemblPlantsGene:TraesCS1A01G363600	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR45172
PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915	SUPFAM:SSF51101	TIGR:cd09612
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:544042224..544043223

Molecular Weight (calculated)

23618.2 Da

IEP (calculated)

9.882

GRAVY (calculated)

-0.464

Length

220 amino acids

Sequence
(BLAST)

001: MQQQQPPPPP RKMVASKKLM KVGPWGGTGG NPWDDGGHTG IRGVTLSYDH RCVVSIAVEY DRSGLAVPGE RHGGAGGNHT TQIKLSFPDE HLTAVSGRYG
101: AVAPGGSPVI RSLAFRTERA AYGPFGAAEG TPFEFAVEGG VIVGLCGRSG WQLDAVGMYV TPLRPEKLYD KVQKLGLMAY RSVMHRLGPA PAPPQDELPE
201: ARVQHQHQNG SVVQKSRKNY

Best Arabidopsis Sequence Match ( AT1G73040.1 )
(BLAST)

001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA

Arabidopsis Description

JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.