CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98276	Soybean	cytosol	72.58	67.4
KRH30293	Soybean	cytosol	71.3	66.21
Bra016496.1-P	Field mustard	cytosol	53.93	50.6
CDY63700	Canola	cytosol	53.75	50.26
AT1G19715.3	Thale cress	cytoskeleton, cytosol, plastid	55.21	50.25
VIT_18s0001g13210.t01	Wine grape	cytosol	60.88	49.7
Bra025760.1-P	Field mustard	extracellular	55.03	49.59
Os01t0775500-01	Rice	cytosol, mitochondrion	30.53	47.85
CDX96652	Canola	extracellular	52.83	46.99
Solyc10g078600.1.1	Tomato	cytosol	55.76	46.85
PGSC0003DMT400021541	Potato	cytosol	55.58	46.48
OQU78268	Sorghum	cytosol, nucleus, plastid	47.9	44.11
Os05t0508400-01	Rice	cytoskeleton, cytosol, plastid	48.63	44.04
Zm00001d038651_P004	Maize	cytosol, nucleus, plastid	47.9	43.96
KRH23344	Soybean	cytosol	14.44	43.65
KXG33492	Sorghum	cytosol	46.62	43.22
OQU87644	Sorghum	cytosol	18.65	42.86
TraesCS1D01G327100.1	Wheat	cytosol	44.79	41.74
HORVU1Hr1G075520.2	Barley	cytosol	44.42	41.47
TraesCS1A01G325500.1	Wheat	cytosol	44.97	41.34
TraesCS1B01G338600.1	Wheat	cytosol	44.79	40.43
TraesCS3B01G344800.1	Wheat	plastid	30.71	37.25
TraesCS3D01G310300.1	Wheat	plastid	30.53	37.03
HORVU3Hr1G075960.3	Barley	plastid	30.35	36.97
TraesCS3A01G321000.1	Wheat	plastid	30.35	36.81
Zm00001d012640_P010	Maize	endoplasmic reticulum	28.15	21.6
Os01t0775600-01	Rice	cytosol	0.55	1.39

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	UniProt:A0A0R0KZW1	EMBL:ACUP02001231	EnsemblPlantsGene:GLYMA_02G227500	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0030246	GO:GO:0043231
GO:GO:0090305	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
EnsemblPlants:KRH72685	ProteinID:KRH72685	ProteinID:KRH72685.1	PFAM:PF01419	PFscan:PS51752	SMART:SM00915
SUPFAM:SSF51101	UniParc:UPI00023BC128	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:41437909..41441540

Molecular Weight (calculated)

59966.0 Da

IEP (calculated)

9.292

GRAVY (calculated)

-0.444

Length

547 amino acids

Sequence
(BLAST)

001: MSFEDSSKKH QSVGPWGGNG GSRWDDGIYS GVRQLVIVHG TGIDSIQIEY DKKGSSIWSE KHGGSGGRKT DKVKLDCPNE FLTKIHGYYG SSNQRGPNFV
101: RSLSFESNKK TYGPFGVELG TYFSVPLTGA KIVGFHGRCG WYVDAIGVYL KSSKQPNPSK TLAHSQSSIT NISENFGYSV IQGTLNENYD IVLALKQKDD
201: FNKPSAKNVS GKISFVKESN NIEHKEKMAH VEKSSPKVGD VVTHGPWGGI GGYVFDDGTY TGIRQINLSR NVGIVWIRVF YDYHGETIWG SKQGGTGGYK
301: NDKIVFDFPY EALTHISGYY GPLMYMGPSV IRSLTFHTTK RKYGPYGEEQ GTYFTTKVKE GKIVGIHGRK GLFLDAFGVH VVEGKVIVPV ATPPKEITSR
401: ESSIGEIGSA QWPTKLVLAK PSAAEEVSCG VVKEPAPCGP GPWGGDGGRS WDDGVFSGIK QIYLTKVSEG ICSIQIEYDR NRQSVWSVKH GGSGGDTMHR
501: IQLEYPNEVL TCISGYYGPI AKDEQHIIMK SLTFNTSRGS MVHLVKK

Best Arabidopsis Sequence Match ( AT1G19715.3 )
(BLAST)

001: MVLTSSYSVE GKPASLGPWG GQSGHAWDDG MYTTVKQIII AHGSGIDSIQ IEYDKNGSSV WSEKRGGKGG KKFDKVKFDY PHEYLISVNG TYGSFDVWGT
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F

Arabidopsis Description

JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [plastid,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.