Factsheet for Bra022161.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G16470.1	Thale cress	cytosol	81.11	80.93
Bra005053.1-P	Field mustard	cytosol	47.56	46.83
Bra000129.1-P	Field mustard	cytosol	47.11	46.7
Bra021177.1-P	Field mustard	nucleus	30.44	45.97
Bra001632.1-P	Field mustard	cytosol	24.44	45.08
Bra001631.1-P	Field mustard	cytosol	28.89	43.77
Bra017082.1-P	Field mustard	cytosol	42.89	43.67
Bra017083.1-P	Field mustard	cytosol	34.22	42.19
Bra021179.1-P	Field mustard	cytosol	41.33	41.15
Bra021176.1-P	Field mustard	cytosol	42.44	40.9
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	16.89	40.64
Bra026177.1-P	Field mustard	cytosol	25.33	38.91
Bra023885.1-P	Field mustard	nucleus	43.78	36.48
Bra018941.1-P	Field mustard	cytosol	34.0	35.33
Bra017017.1-P	Field mustard	cytosol	26.67	35.09
Bra013637.1-P	Field mustard	cytosol	33.56	32.27
Bra018942.1-P	Field mustard	cytosol	27.11	32.11
Bra013639.1-P	Field mustard	cytosol	32.22	30.15
Bra027095.1-P	Field mustard	cytosol	36.89	28.23
Bra022160.1-P	Field mustard	cytosol	41.11	27.45
Bra018945.1-P	Field mustard	cytosol	30.22	25.81
Bra014306.1-P	Field mustard	cytosol	22.67	24.88
Bra030443.1-P	Field mustard	cytosol	38.44	23.32
Bra008068.1-P	Field mustard	cytosol	9.11	23.3
Bra014308.1-P	Field mustard	cytosol	34.89	21.42
Bra016496.1-P	Field mustard	cytosol	26.0	20.07
Bra014309.1-P	Field mustard	cytosol	36.44	19.2
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	6.22	18.79
Bra025760.1-P	Field mustard	extracellular	25.11	18.62
Bra002818.1-P	Field mustard	cytosol	33.78	17.76
Bra030402.1-P	Field mustard	cytosol	36.89	15.5
Bra014307.1-P	Field mustard	cytosol	29.56	15.2
Bra018940.1-P	Field mustard	cytosol	39.56	15.1
Bra014231.1-P	Field mustard	cytosol	34.44	14.8

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	EnsemblPlantsGene:Bra022161	EnsemblPlants:Bra022161.1	EnsemblPlants:Bra022161.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005773	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0009409
GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0009611	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009753	GO:GO:0009791	GO:GO:0010228	GO:GO:0016020	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	UniProt:M4E064
PFAM:PF01419	PFscan:PS51752	PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	SMART:SM00915	SUPFAM:SSF51101
UniParc:UPI0002547828	SEG:seg	:	:	:	:

Description

AT3G16470 (E=1e-176) JR1 | JR1

Coordinates

chrA05:+:19413369..19414995

Molecular Weight (calculated)

48287.0 Da

IEP (calculated)

4.838

GRAVY (calculated)

-0.237

Length

450 amino acids

Sequence
(BLAST)

001: MATKLAAQGG RGGEVWDDGG VYENVKKVYV GQGDSGVVYV KFDYEKDGKI VSLEHGKKTI LDPEEFELDP EDYITSVKVY YEKLFGTPVE IITALIFKTF
101: KGKVSQPFGL ASGTEAELGG GKIVGFHGSA SDAIHSLGAY ISPSTTPVTP PASGGPTKLD AQGGRGGELW DDGGVYENVK KVYVGQGDSG VVYVKFDYEK
201: DGKTVSLEHG KKTILDPEEF EVDSDDYITS VKVYYEKLFG TPTEIITALI FTTFKGKVSQ PFGMASGQEA ELGGGKIVGF HGSASDVIHS LGVYIAPTST
301: PVTPSDTIPA QGGDAGVAWD DGVHDGLRKI YVGQGDSCVT YFKAEYVKAS KPVLGIDHGK KTLLDPEEFV LEDGEYITSV IGYHDKIYGV DAPAIICLKF
401: KTNKRTSDPY GMNSGTEFVL EKKDHKIVGF YGQAGDFLYK IGVKVAPIAN

Best Arabidopsis Sequence Match ( AT3G16470.1 )
(BLAST)

001: MAKKLEAQGG RGGEEWDDGG AYENVKKVYV GQGDSGVVYV KFDYEKDGKI VSHEHGKQTL LGTEEFVVDP EDYITSVKIY YEKLFGSPIE IVTALIFKTF
101: KGKTSQPFGL TSGEEAELGG GKIVGFHGSS SDLIHSVGVY IIPSTTPLTP PVSGGLTKLE AQGGRGGDVW DDGGAYDNVK KVYVGQGDSG VVYVKFDYEK
201: DGKIVSLEHG KQTLLGTEEF EIDPEDYITY VKVYYEKLFG SPIEIVTALI FKTFKGKTSQ PFGLTSGEEA ELGGGKIVGF HGTSSDLIHS LGAYIIPSST
301: PLTPSSNTIP AQGGDGGVAW DDGVHDSVKK IYVGQGDSCV TYFKADYEKA SKPVLGSDHG KKTLLGAEEF VLGPDEYVTA VSGYYDKIFS VDAPAIVSLK
401: FKTNKRTSIP YGLEGGTEFV LEKKDHKIVG FYGQAGEYLY KLGVNVAPIA K

Arabidopsis Description

JAL35Jacalin-related lectin 35 [Source:UniProtKB/Swiss-Prot;Acc:O04309]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.