Factsheet for Bra018940.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
extracellular 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22878	Canola	cytosol	82.53	99.08
CDY70821	Canola	cytosol	36.81	96.88
Bra030402.1-P	Field mustard	cytosol	54.79	60.32
Bra018941.1-P	Field mustard	cytosol	17.9	48.73
Bra018942.1-P	Field mustard	cytosol	14.67	45.53
Bra017083.1-P	Field mustard	cytosol	12.98	41.92
Bra000129.1-P	Field mustard	cytosol	15.95	41.41
Bra021176.1-P	Field mustard	cytosol	15.86	40.04
Bra017082.1-P	Field mustard	cytosol	14.84	39.59
Bra022161.1-P	Field mustard	cytosol	15.1	39.56
Bra005053.1-P	Field mustard	cytosol	15.1	38.95
Bra022160.1-P	Field mustard	cytosol	21.63	37.83
Bra014308.1-P	Field mustard	cytosol	22.99	36.97
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	5.77	36.36
Bra014306.1-P	Field mustard	cytosol	12.47	35.85
Bra001631.1-P	Field mustard	cytosol	8.57	34.01
Bra017017.1-P	Field mustard	cytosol	9.58	33.04
Bra001632.1-P	Field mustard	cytosol	6.79	32.79
Bra026177.1-P	Field mustard	cytosol	8.14	32.76
Bra013637.1-P	Field mustard	cytosol	12.89	32.48
Bra021179.1-P	Field mustard	cytosol	12.38	32.3
Bra018945.1-P	Field mustard	cytosol	14.42	32.26
Bra021177.1-P	Field mustard	nucleus	8.06	31.88
Bra013639.1-P	Field mustard	cytosol	12.89	31.6
Bra027095.1-P	Field mustard	cytosol	15.52	31.12
Bra023885.1-P	Field mustard	nucleus	13.91	30.37
Bra014309.1-P	Field mustard	cytosol	21.63	29.86
Bra030443.1-P	Field mustard	cytosol	17.56	27.9
Bra014307.1-P	Field mustard	cytosol	20.27	27.31
Bra008068.1-P	Field mustard	cytosol	4.07	27.27
Bra014231.1-P	Field mustard	cytosol	22.73	25.6
Bra016496.1-P	Field mustard	cytosol	12.3	24.87
Bra025760.1-P	Field mustard	extracellular	11.7	22.73
Bra002818.1-P	Field mustard	cytosol	15.69	21.61
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	2.63	20.81

Protein Annotations

EnsemblPlants:Bra018940.1	EnsemblPlants:Bra018940.1-P	EnsemblPlantsGene:Bra018940	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI000253E917
UniProt:M4DQZ7	MapMan:35.1	:	:	:	:

Description

AT1G52030 (E=1e-120) MBP2, MBP1.2, F-ATMBP | MBP2 (MYROSINASE-BINDING PROTEIN 2); sugar binding / thioglucosidase binding

Coordinates

chrA06:+:1120456..1124594

Molecular Weight (calculated)

124065.0 Da

IEP (calculated)

5.356

GRAVY (calculated)

-0.583

Length

1179 amino acids

Sequence
(BLAST)

0001: MSWDDGKHAK VKKVQLTFDD VIRSIEVEYE GTNLKSQRRG TVGTRSDGFT LSTDEYITSV SGYYKTTFSG DHITALTFKT NKKTYGPYGN KTQNYFSADA
0101: PKDSQIAGFL GTSGNALSSL DVHFAPIPTP GSIKPQPGGS GTGGGGSKPG GSGNESGGGG GGSKPGGSGN ESGGGSSKPG GSGNESGGGG GGGSKPGGSG
0201: NESGGGGGSG NETGNDGPGK MGPLGGDKGN VFDDVGFEGV KKITVGADQY SVTYIKIEYI KDGQVVVREH GTVRGELKEF SVDYPNDNIS ITAVSGTYKH
0301: IFTYDTTLIT SLYFTTSKGF TSPLFGIDSE KKGTDFEFKG ENGGKLIGLH GRGGNAIDAI GAYFDTGSQG GKGGGGGSQT DVPGKKGPLG GEKGEEFNDV
0401: GFEGVKKITV GADQYSVTYI KIEYVKDGKV EVREHGTSRG ELQEFSVDYP NDSITAVSGT YKHIFTYDTT LITSLYFTTS KGFTSPLFGI DSEKKGTEFE
0501: FKGENGGKLL GFHGRGGNAI DAIGAYFDTG SQGGKGGDGS KTDVPGKKGP LGGDKGEEFN DVGFEGVKKI TVGADQYSVT YIKIEYVKDG KVEIREHGTS
0601: RGELQEFSVD YPNDSITAVS GTYKRVYTYD TTLITSLYFT TSKGFTSPLF GINSEKKGTE FEFKGENGGK LIGLHGRGGN AIDAIGAYFD TGSQGGDGGD
0701: VPSKDGPNTD VPGKKGPLGG DKGEPFDDVG FEGVKKITVG VDNLSITYIK IEYVKDGKVE VREHGTARGK LQEFSVDYPN DSITEVAGTY KHNYTYDTTL
0801: ITSLYFTTSK GFTSPLFGID SEKKGTEFEF KDENGGKLIG FHGRGGNAID AIGAYFDTGS KPGGNGDNGS GSNSGSSPQK LDAQGGKGGN QWDDSGDHDG
0901: VTKIHVAYSR VIEQIKFEYV KNGETKEGPA HGVKGGARTM IATFEISHPN EYLLSVKGWS DSSNKIVGIQ FTTNTKTSDY YGFEKYPGDE GTDILLEVKD
1001: KKIVGFHGFA DNQLNSLGAY FAPIASTPLK PSKKLQGVGG DEGASWDDGA FDGVKKIQVG QNNDGVSFVA VEYQNGSQKV VGDGHGKQSS LGVETFELAD
1101: GEYITSVGVY YDKIHAEGRG VTVVTSLIFK TNKQISQPFG MTGGEYVELK EEGNKIVGFH GKASDWVHQI GVYVAPVTK

Best Arabidopsis Sequence Match ( AT1G52030.1 )
(BLAST)

001: MSEKVGAMGG NKGGAFDDGV FDGVKKVIVG KDFNNVTYIK VEYEKDGKFE IREHGTNRGQ LKEFSVDYPN EYITAVGGSY DTVFGYGSAL IKSLLFKTSY
101: GRTSPILGHT TLLGNPAGKE FMLESKYGGK LLGFHGRSGE ALDAIGPHFF AVNSSLKHFK PQGGNGGSAW DDGAFDGVRK VLVGRNGKFV SYVRFEYAKG
201: ERMVPHAHGK RQEAPQEFVV DYPNEHITSV EGTIDGYLSS LKFTTSKGRT SPVFGNVVGS KFVFEETSFK LVGFCGRSGE AIDALGAHFA PLPAPTPAPA
301: PAPAPAPAPA PSPAPASAPV PAPAPTPAPA PAPPNKVEAL GGNGGTIFDD GAFDHVRKVY IGQGDSGVAY VKFEYRKDGK RETREHGKMT VLGTEEFEVE
401: SDDYITSIEV SVDNVFGFKS EIVTSLVFKT FKGITSQPFG METEKKLELK DGKGGKLVGF HGKASDVLYA LGAYFAPTTN STTPSTPSTS KKLQARGGNG
501: GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DRHGKQTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV VTSLTFKTNK RTSQPFGMTA
601: GEHFELNEDG YKIVGFHGKA GDLVHQIGVH AVPIFTNYRC VF

Arabidopsis Description

F-ATMBPMyrosinase-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.