Factsheet for Bra022160.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92074	Canola	cytosol	95.99	99.54
Bra021179.1-P	Field mustard	cytosol	53.71	80.09
Bra021177.1-P	Field mustard	nucleus	27.74	62.75
Bra001631.1-P	Field mustard	cytosol	27.45	62.29
Bra001632.1-P	Field mustard	cytosol	22.11	61.07
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	13.8	49.73
Bra000129.1-P	Field mustard	cytosol	28.78	42.73
Bra026177.1-P	Field mustard	cytosol	18.55	42.66
Bra005053.1-P	Field mustard	cytosol	28.34	41.79
Bra022161.1-P	Field mustard	cytosol	27.45	41.11
Bra027095.1-P	Field mustard	cytosol	34.12	39.12
Bra021176.1-P	Field mustard	cytosol	27.0	38.97
Bra017082.1-P	Field mustard	cytosol	25.52	38.91
Bra017083.1-P	Field mustard	cytosol	19.88	36.71
Bra018945.1-P	Field mustard	cytosol	27.74	35.48
Bra030443.1-P	Field mustard	cytosol	38.87	35.31
Bra023885.1-P	Field mustard	nucleus	27.6	34.44
Bra018941.1-P	Field mustard	cytosol	22.11	34.41
Bra018942.1-P	Field mustard	cytosol	19.14	33.95
Bra013639.1-P	Field mustard	cytosol	23.0	32.22
Bra013637.1-P	Field mustard	cytosol	22.11	31.84
Bra017017.1-P	Field mustard	cytosol	15.28	30.12
Bra014231.1-P	Field mustard	cytosol	45.55	29.32
Bra008068.1-P	Field mustard	cytosol	7.42	28.41
Bra030402.1-P	Field mustard	cytosol	40.5	25.49
Bra014306.1-P	Field mustard	cytosol	15.13	24.88
Bra016496.1-P	Field mustard	cytosol	20.62	23.84
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	5.04	22.82
Bra014308.1-P	Field mustard	cytosol	24.33	22.37
Bra018940.1-P	Field mustard	cytosol	37.83	21.63
Bra025760.1-P	Field mustard	extracellular	19.14	21.25
Bra014309.1-P	Field mustard	cytosol	24.48	19.32
Bra002818.1-P	Field mustard	cytosol	22.11	17.41
Bra014307.1-P	Field mustard	cytosol	20.18	15.54

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	EnsemblPlantsGene:Bra022160	EnsemblPlants:Bra022160.1	EnsemblPlants:Bra022160.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0008150	GO:GO:0009409	GO:GO:0009506
GO:GO:0009628	GO:GO:0016020	GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom
InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	UniProt:M4E063	PFAM:PF01419	PFscan:PS51752	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0002547829	SEG:seg	:

Description

AT3G16460 (E=4e-169) | jacalin lectin family protein

Coordinates

chrA05:-:19415391..19417797

Molecular Weight (calculated)

69205.2 Da

IEP (calculated)

5.850

GRAVY (calculated)

-0.368

Length

674 amino acids

Sequence
(BLAST)

001: MSWDDGKHAK VNKVQITYDD VIYSIQVTYA GTALQSQRRG SVGPKTAEFT LGPDEYITAL SAYGKTLSTQ DVITSLTFTT NKGTYGPYGN KTGYQISARE
101: GTGKQIAGFL GTSGNVLNSI DVHYAPIPTG TGGTGTGTGG TGTAETGTGG TGTGGTGTGG TGTGGTGGTG TGGTGGTGTG GTGTGGTGTG GTGTGGTGTG
201: GTGTGGTGTG GTGTGGSGAE KLDAQGGTGG TAWDDGSDHD GVTKITVRTG GVGVQFVQFD YVKVGQPKQG ALRGVQGSRG STREILINHP DEYLVSVEGW
301: YDSANVILGI QFKTNQKTSD YLGYEFDGSG KKFTLQVQGK KIIGFHGFAS DHLNSIGAYF VPVSSTPTTP TVPPKKLEAK GGASGAVWDD GAHDNVKKVS
401: VGQGQDGIAA VKFEYRNGSQ VVIGAERGTP TLLGYEEFEL ESDEYITIVE GTYDKILGSD GLTMLTFKTN KNRTYGPYGL EGSTHFDLKE DGHKITGFHG
501: RAGDNSITAI GVYLAPVGTI PLTPATQTKK LEAKGGDGGT LWDDGAFDGV RKVSVGQAQD GIGAVKFVYN NGSSEVIGDE HGKSTLLGFE EFELNYPSEY
601: ITEVHGTFDK IFASNSAIVT MLTFKTNKPA TYGPFGLTAG TPFDLKEDGH KIVGFHGSAG DLLHKFGVHV LPIN

Best Arabidopsis Sequence Match ( AT1G52040.1 )
(BLAST)

001: MSTGGPQKLE AQGGKEGKEW DDGAEHDGVT KIYVAAGGLG IEQIRFDYVK NGQPKEGSFH GVKGRSTIST IEISHPAEYL ISMEGWYDST NIIQGIQFKS
101: NKHTSQYFGY EFLGDGTQFS LQVNDNKIIS FHGFADSHLN SVGAYFAPIS SSLTTTPNKV EAQGGNGGET FDDGVFDHVR KVYVGQGESG VAYVKFEYEK
201: DGKRETRDHG KMTLLGTEEF EVDSDDYITS IEVSVDKVFG YNSEIVTALV FKTSKGTTSP PFGMVTEKKF ELKDGNGGKL AGFHGKASDV LYALGAYFAP
301: STTSTTPSTT KKLQARGGNG GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DGHGKKTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV
401: VTSLMFKTNK RTSQPFGMTA GEHFELKEDG YKVVGFHGKA GDLVHQIGVH IVPIFTNYRV AI

Arabidopsis Description

MBP1Myrosinase-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.