Factsheet for Bra014231.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
mitochondrion 2
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59365	Canola	cytosol	75.74	99.37
Bra001632.1-P	Field mustard	cytosol	11.08	47.54
Bra001631.1-P	Field mustard	cytosol	13.28	46.8
Bra021177.1-P	Field mustard	nucleus	13.28	46.64
Bra022160.1-P	Field mustard	cytosol	29.32	45.55
Bra021179.1-P	Field mustard	cytosol	17.77	41.15
Bra000129.1-P	Field mustard	cytosol	15.38	35.46
Bra005053.1-P	Field mustard	cytosol	15.47	35.45
Bra017082.1-P	Field mustard	cytosol	14.9	35.29
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	6.21	34.76
Bra022161.1-P	Field mustard	cytosol	14.8	34.44
Bra026177.1-P	Field mustard	cytosol	9.36	33.45
Bra017083.1-P	Field mustard	cytosol	11.65	33.42
Bra018945.1-P	Field mustard	cytosol	16.05	31.88
Bra021176.1-P	Field mustard	cytosol	13.85	31.05
Bra027095.1-P	Field mustard	cytosol	17.38	30.95
Bra018942.1-P	Field mustard	cytosol	11.17	30.79
Bra018941.1-P	Field mustard	cytosol	12.51	30.25
Bra017017.1-P	Field mustard	cytosol	9.55	29.24
Bra008068.1-P	Field mustard	cytosol	4.78	28.41
Bra023885.1-P	Field mustard	nucleus	14.42	27.96
Bra030443.1-P	Field mustard	cytosol	19.48	27.49
Bra013639.1-P	Field mustard	cytosol	12.03	26.2
Bra013637.1-P	Field mustard	cytosol	11.46	25.64
Bra014308.1-P	Field mustard	cytosol	17.67	25.24
Bra014306.1-P	Field mustard	cytosol	9.26	23.66
Bra018940.1-P	Field mustard	cytosol	25.6	22.73
Bra016496.1-P	Field mustard	cytosol	12.51	22.47
Bra014309.1-P	Field mustard	cytosol	17.48	21.43
Bra030402.1-P	Field mustard	cytosol	21.59	21.1
Bra014307.1-P	Field mustard	cytosol	17.57	21.03
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	2.96	20.81
Bra025760.1-P	Field mustard	extracellular	11.65	20.1
Bra002818.1-P	Field mustard	cytosol	12.7	15.54

Protein Annotations

EnsemblPlants:Bra014231.1	EnsemblPlants:Bra014231.1-P	EnsemblPlantsGene:Bra014231	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI000254617E
UniProt:M4DCL5	MapMan:35.1	:	:	:	:

Description

AT3G16460 (E=2e-106) | jacalin lectin family protein

Coordinates

chrA08:-:2342347..2350923

Molecular Weight (calculated)

112800.0 Da

IEP (calculated)

6.786

GRAVY (calculated)

-0.281

Length

1047 amino acids

Sequence
(BLAST)

0001: MSWDDGTARK VKKVQITYDD VIYSVQVTYG TALQAPRRGS VGPMSVEFTL ESDEYITALS GYALSTQDVV TSLTFTTNKK TYGPYGNKFG YQISAPEKTG
0101: KQIAGFHGTK DNILNSIDVH YAPIPTGTGG SETGSGVQKL PGEGLVGGTA WDDGSDHDGV TNIYVASTLL GIKNVMFGYM KDGQSKQGGH HGGDPTKQEI
0201: VINHPDEHLV SVEGWYESSS KFIMGIQFKT NYKICASMGY RYEGGNDYKF THQVQDKKII GFHGFASNHL NSIGAYFAPL SSTTTLPIGT GGSGAQKLGA
0301: QGVTGGSAWD DGSYHDGVTK IVVRTCTLGV QFVNFFYDND IGAVHGAPGD PTGSTQHIVI NHPDEHLVSI EGWYISNYIS GIRFKTNQKT SVYIGYEYTG
0401: SGTIFTLQVK DKKIIGFHGF ASDHLNSIGA YFVPVLSTPT LPIVLPKRFG AVWDDGTHDK VKKIFIGLGQ DVIASVKFEY INGSGVVNGV EHGTPTLLGF
0501: EEFTLELGLD EYITALSAYV ETLSTRDVVT SLTFTTSKKN YGPYGNKSGF QIFSPGETGK QIAGFHGTSG NVLNSISGYY APIPTYKLVA VGGTGGSAWD
0601: DGSDHDGVTK ITVRTGGVGV QYVKFDYVKA GQPKQGTLHG VHGSRGSTRE IVINHPDEHL VSVEGWYDSS NVILGIQFKT NLKTSDYLGY EFEGTGTKFT
0701: LQVKDKKIIG FHGFASDHLN SIGAYFVLLP STTTTLNPIV PQKKLGAVWD DRTHDKVKKV FVGLGQDGIA SVKFEYINGS GVVNGVENGT PTLLGFEEFT
0801: LGPYEYVTAL SAYTKTLSTQ DIVTSLTFTT NKKTYGPYGN KSGFLFPFPE ETGKQIAGFH GTGGNVLNSI QVHYAPIPTV QKLDAQGGTG GTKWDDGSDH
0901: DGVTNIYVRS NMDGIQYVSF DYLKAGQPKQ GAHHGGSGSR GSKGEIAINH PDEQVVSVEG WYDSANVICG VRFRTNQKIY DYMGYKFDGT GTKFTLKVQD
1001: KKIIGFHGFA TNQLISLGAY FAPLSSATAP PIVTPKEVEA KGGDFNS

Best Arabidopsis Sequence Match ( AT1G33790.2 )
(BLAST)

001: MAQKLEAKGG KGGNQWDDLL DHDNIAKIHV QGGHEGIQYV KFDYVKFDNL KIGQPKLGSI HGLSRKGFTQ TFEIDPTSEY IVSVEGYYDE SKGIIQALKF
101: KTNKKTSDMI GYDENGLKFS LEVKGKAIIG FHGFADTNLN SLGAYFAPAP PTKFDYQGGS GAQLWDDGSN YNGVRKVSFS LDDTEIRQIR IEYDKSGLVE
201: KREYGSNVGR QEEFVLDYPT EYIIYMEGTC DIVSDTSKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSPLILSAP
301: APPPPPAEKL QAKGGNGGNQ WDDLADHDHV TKIYVQGGQE GIQYVKFDYV KNGQPQSGSV HGLLGRGFTQ TFEIDPTNEH LVSVEGYYDE SKGLVQGLKF
401: KTNKKTSDMI GYDENGLKFS LEVNGKKIIG FHGYAQTYLN SLGAYFVTAP PTKFDYQGGS GAQLWDDGTN YNGVRKISFA LDANEIRQIR IDYDKGGLIE
501: RREYGGNVGR QEEFVVDYPS EYIIYMEGTC DIVSDASKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSRFILPPS
601: AETLQAKGGE GGDPWSDGVF NGVRNIYVGQ GENGVSAVKF VYDKDSQVAE GNDHGKPTLL GYEEFKLEYP SEYITTVEGC FDKIFGSGGG VITMLKFKTN
701: KRTSPPFGLE TTSNFVLGKE GYKIVGFHGT SSHELHQLGV YVMPI

Arabidopsis Description

JAL4Jacalin-related lectin 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.