Factsheet for Bra026177.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45301	Canola	cytosol	99.66	99.66
CDY53520	Canola	cytosol	98.63	98.63
AT3G21380.1	Thale cress	cytosol	86.35	55.0
Bra023885.1-P	Field mustard	nucleus	93.52	50.74
Bra021177.1-P	Field mustard	nucleus	43.34	42.62
Bra001632.1-P	Field mustard	cytosol	35.15	42.21
Bra001631.1-P	Field mustard	cytosol	41.3	40.74
Bra021176.1-P	Field mustard	cytosol	43.34	27.19
Bra021179.1-P	Field mustard	cytosol	41.64	26.99
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	17.06	26.74
Bra022161.1-P	Field mustard	cytosol	38.91	25.33
Bra005053.1-P	Field mustard	cytosol	38.91	24.95
Bra000129.1-P	Field mustard	cytosol	37.88	24.45
Bra018942.1-P	Field mustard	cytosol	30.72	23.68
Bra018941.1-P	Field mustard	cytosol	32.08	21.71
Bra017082.1-P	Field mustard	cytosol	31.06	20.59
Bra027095.1-P	Field mustard	cytosol	39.25	19.56
Bra022160.1-P	Field mustard	cytosol	42.66	18.55
Bra013639.1-P	Field mustard	cytosol	30.03	18.3
Bra013637.1-P	Field mustard	cytosol	29.01	18.16
Bra017083.1-P	Field mustard	cytosol	21.16	16.99
Bra030443.1-P	Field mustard	cytosol	39.93	15.77
Bra017017.1-P	Field mustard	cytosol	18.09	15.5
Bra008068.1-P	Field mustard	cytosol	8.53	14.2
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	7.17	14.09
Bra018945.1-P	Field mustard	cytosol	24.57	13.66
Bra016496.1-P	Field mustard	cytosol	26.62	13.38
Bra025760.1-P	Field mustard	extracellular	27.3	13.18
Bra014308.1-P	Field mustard	cytosol	32.42	12.96
Bra014309.1-P	Field mustard	cytosol	32.76	11.24
Bra002818.1-P	Field mustard	cytosol	30.72	10.51
Bra014231.1-P	Field mustard	cytosol	33.45	9.36
Bra014306.1-P	Field mustard	cytosol	12.63	9.02
Bra014307.1-P	Field mustard	cytosol	24.91	8.34
Bra030402.1-P	Field mustard	cytosol	30.03	8.22
Bra018940.1-P	Field mustard	cytosol	32.76	8.14

Protein Annotations

EnsemblPlants:Bra026177.1	EnsemblPlants:Bra026177.1-P	EnsemblPlantsGene:Bra026177	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915
SUPFAM:SSF51101	UniParc:UPI000253EFB6	UniProt:M4EBL8	MapMan:35.1	:	:

Description

AT3G21380 (E=2e-107) | LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: MBP1 (MYROSINASE-BINDING PROTEIN 1); protein binding (TAIR:AT1G52040.1); Has 1279 Blast hits to 507 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1276; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

Coordinates

chrA06:+:5753304..5754397

Molecular Weight (calculated)

31526.8 Da

IEP (calculated)

6.429

GRAVY (calculated)

-0.554

Length

293 amino acids

Sequence
(BLAST)

001: MAAATMSWDD GKHMRVKRVQ LTYEDVIKSI EAVYDDDQNP KRHGTPGKKS DGVSLSPDEY ITDVTGYYKT TGNEDAIAAL AFRTNKTEYG PFGNKTGNQF
101: SIQAPKDNQV AGFQGTSSNV LNSIDVHFAP IPSASAGGQP AGSASSAKKL EAKGGNAGNP WDDGAHDGVK KVYVGQGESG VTYVKFVYEK DSKEVPGNDH
201: GKKTLLAPEE FVLDPNEYIT AVEINYDNIF GTESEIITML KFMTNKRTSP PFGLEGAKSV LLKEDGHKVV GFHGKAGADI LHQVGVHVKP ISK

Best Arabidopsis Sequence Match ( AT3G21380.1 )
(BLAST)

001: MAAATMSWDD GKHMKVKRVQ ITYEDVINSI EAEYDGDTHN PHHHGTPGKK SDGVSLSPDE YITDVTGYYK TTGAEDAIAA LAFKTNKTEY GPYGNKTRNQ
101: FSIHAPKDNQ IAGFQGISSN VLNSIDVHFA PLPSSSSSSS SLSQANKVDA QGGKGGTSWD DGAHDHVRRV YIGQGDSGVT YVKFEYEKDD KKESREHGKK
201: TLLGAEVFEV DPDDYITSVE VQSDRIFGQD TEVITSLIFK TSKGKFSPPF GLEGSQKYEL KDKNGGKLVG FHGRVGGELL NALGAYFAPS SGRGTPSATQ
301: PPGSAQPTGS AGAKKLEAKG GNVGNPWDDG PHEGVRKVYI GQGDSGVSYV KFVYDKDSKE VPGNDHGKRT LLAPEEFLLE YPNEYITSVE LNYDKIFGTE
401: GEIITMLRFT TNKRTSPPFG LEGAKSVLLK EDGHKIVGFH GKAGADIIHQ VGVHVKPISK

Arabidopsis Description

JAL36Jacalin-related lectin 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIF8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.