Factsheet for Bra030443.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009632.1-P
Bra028893.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G52100.1	Bra009632.1-P	AT5G01210.1	21798944
AT1G52100.1	Bra028893.1-P	AT5G01210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43910	Canola	cytosol	99.87	99.87
AT1G52100.1	Thale cress	cytosol	41.91	71.17
Bra021177.1-P	Field mustard	nucleus	22.24	55.37
Bra001631.1-P	Field mustard	cytosol	21.7	54.21
Bra027095.1-P	Field mustard	cytosol	42.45	53.57
Bra001632.1-P	Field mustard	cytosol	17.39	52.87
Bra018945.1-P	Field mustard	cytosol	35.18	49.53
Bra021179.1-P	Field mustard	cytosol	28.84	47.35
Bra005053.1-P	Field mustard	cytosol	26.15	42.45
Bra000129.1-P	Field mustard	cytosol	25.74	42.07
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	10.51	41.71
Bra017083.1-P	Field mustard	cytosol	19.68	40.0
Bra026177.1-P	Field mustard	cytosol	15.77	39.93
Bra017082.1-P	Field mustard	cytosol	23.72	39.82
Bra021176.1-P	Field mustard	cytosol	24.93	39.61
Bra022160.1-P	Field mustard	cytosol	35.31	38.87
Bra022161.1-P	Field mustard	cytosol	23.32	38.44
Bra018941.1-P	Field mustard	cytosol	20.62	35.33
Bra018942.1-P	Field mustard	cytosol	18.06	35.26
Bra023885.1-P	Field mustard	nucleus	23.72	32.59
Bra017017.1-P	Field mustard	cytosol	14.82	32.16
Bra008068.1-P	Field mustard	cytosol	7.55	31.82
Bra013637.1-P	Field mustard	cytosol	18.46	29.27
Bra013639.1-P	Field mustard	cytosol	18.73	28.9
Bra014306.1-P	Field mustard	cytosol	14.82	26.83
Bra016496.1-P	Field mustard	cytosol	19.54	24.87
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	4.99	24.83
Bra025760.1-P	Field mustard	extracellular	19.14	23.39
Bra014308.1-P	Field mustard	cytosol	22.24	22.51
Bra014309.1-P	Field mustard	cytosol	22.64	19.67
Bra030402.1-P	Field mustard	cytosol	28.17	19.51
Bra014231.1-P	Field mustard	cytosol	27.49	19.48
Bra002818.1-P	Field mustard	cytosol	20.75	17.99
Bra018940.1-P	Field mustard	cytosol	27.9	17.56
Bra014307.1-P	Field mustard	cytosol	18.87	16.0

Protein Annotations

EnsemblPlants:Bra030443.1	EnsemblPlants:Bra030443.1-P	EnsemblPlantsGene:Bra030443	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915
SUPFAM:SSF51101	UniParc:UPI0002547ACC	UniProt:M4ENS3	MapMan:35.1	:	:

Description

AT5G35940 (E=3e-178) | jacalin lectin family protein

Coordinates

chrA05:+:11277912..11282827

Molecular Weight (calculated)

81174.8 Da

IEP (calculated)

6.698

GRAVY (calculated)

-0.391

Length

742 amino acids

Sequence
(BLAST)

001: MVLKVEAKGG NGGKEWDDGF DYEGVTKIHV RGGREGIQFI MFEYVKAGKA TVGPIHGVSD RRGLTQTLEI KHMENEHLVS VEGYYNESTG VIQSLQFETN
101: MKTSDLIGYD EGTKFSLRAR GKKIIGFHGF AEKNLNSLGA YFIRMPPTKS AMQGGQTTGV GYDDGGDYDG VKKVVVTTDG TAIRHIKFHY DKAGNEEIRE
201: RGVTTGTQHE FTINHPYEYI TSVEGSYAVT QPYNCIVLTS LTFKTSKGRT SSTIGPVTGT KFVLESKGNA IVGFHGRVGS CVDSIGAYYS QVFPSQETAL
301: KVEPKGGKGG VQWDDGSDYE GVTKIHVRGG LEGIQFIKFE YKKAGQTIVG PVHGVSGRGM TQTFDIIHLE NEYLRSVEGY YDESTGVIQS LRFITNQKTS
401: DLMGFNEGTK FSLAANGKKI IGFHGFAEKN LNSLGAYFIR IPSTKSAMEG GQTTGRSYDD GGDCDGLRKV YVTFDGTAIR HIKFDYDIAG QVEMRQRGVK
501: EGTEYEFEVD HPREYITSVE GSYAVTQPYG CIVLRSLIFK TSKGRTSSNI GTVTGTKFVH ESKGNVIVGF HGRVGSCIDS IGVYYSPFSP PSPPSEKLQG
601: HGGDGGDFWD DGVFKNVKKI YVGQGDVGIA SLMFEYENET SEMIVGKEHG KKTLLGYEEF ELDYPSEYIT SIEGCHDNVV GAESGVITML RFKTNKRTSP
701: PFGLESASSF AIQKEGYKIV GFHGKSSALI NQIGVHVVPI TE

Best Arabidopsis Sequence Match ( AT1G33790.2 )
(BLAST)

001: MAQKLEAKGG KGGNQWDDLL DHDNIAKIHV QGGHEGIQYV KFDYVKFDNL KIGQPKLGSI HGLSRKGFTQ TFEIDPTSEY IVSVEGYYDE SKGIIQALKF
101: KTNKKTSDMI GYDENGLKFS LEVKGKAIIG FHGFADTNLN SLGAYFAPAP PTKFDYQGGS GAQLWDDGSN YNGVRKVSFS LDDTEIRQIR IEYDKSGLVE
201: KREYGSNVGR QEEFVLDYPT EYIIYMEGTC DIVSDTSKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSPLILSAP
301: APPPPPAEKL QAKGGNGGNQ WDDLADHDHV TKIYVQGGQE GIQYVKFDYV KNGQPQSGSV HGLLGRGFTQ TFEIDPTNEH LVSVEGYYDE SKGLVQGLKF
401: KTNKKTSDMI GYDENGLKFS LEVNGKKIIG FHGYAQTYLN SLGAYFVTAP PTKFDYQGGS GAQLWDDGTN YNGVRKISFA LDANEIRQIR IDYDKGGLIE
501: RREYGGNVGR QEEFVVDYPS EYIIYMEGTC DIVSDASKNR VRSLMFKTSK GRTSPIFGKV AARKFVFESN GSALIGFHGR AAAAVDAIGA YFSRFILPPS
601: AETLQAKGGE GGDPWSDGVF NGVRNIYVGQ GENGVSAVKF VYDKDSQVAE GNDHGKPTLL GYEEFKLEYP SEYITTVEGC FDKIFGSGGG VITMLKFKTN
701: KRTSPPFGLE TTSNFVLGKE GYKIVGFHGT SSHELHQLGV YVMPI

Arabidopsis Description

JAL4Jacalin-related lectin 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.