Factsheet for Bra017083.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06999	Canola	cytosol	79.18	90.88
Bra017082.1-P	Field mustard	cytosol	86.85	71.72
Bra005053.1-P	Field mustard	cytosol	77.53	61.93
Bra000129.1-P	Field mustard	cytosol	73.7	59.25
AT2G39310.4	Thale cress	cytosol	73.7	58.73
Bra017017.1-P	Field mustard	cytosol	47.67	50.88
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	20.0	39.04
Bra022161.1-P	Field mustard	cytosol	42.19	34.22
Bra014306.1-P	Field mustard	cytosol	36.16	32.2
Bra021176.1-P	Field mustard	cytosol	40.55	31.69
Bra018941.1-P	Field mustard	cytosol	35.89	30.25
Bra018942.1-P	Field mustard	cytosol	30.96	29.74
Bra021179.1-P	Field mustard	cytosol	35.62	28.76
Bra013639.1-P	Field mustard	cytosol	36.16	27.44
Bra013637.1-P	Field mustard	cytosol	35.07	27.35
Bra021177.1-P	Field mustard	nucleus	22.19	27.18
Bra001631.1-P	Field mustard	cytosol	21.64	26.6
Bra018945.1-P	Field mustard	cytosol	37.53	26.0
Bra001632.1-P	Field mustard	cytosol	16.44	24.59
Bra027095.1-P	Field mustard	cytosol	38.63	23.98
Bra008068.1-P	Field mustard	cytosol	11.51	23.86
Bra023885.1-P	Field mustard	nucleus	34.79	23.52
Bra014308.1-P	Field mustard	cytosol	43.01	21.42
Bra026177.1-P	Field mustard	cytosol	16.99	21.16
Bra022160.1-P	Field mustard	cytosol	36.71	19.88
Bra030443.1-P	Field mustard	cytosol	40.0	19.68
Bra014309.1-P	Field mustard	cytosol	43.29	18.5
Bra016496.1-P	Field mustard	cytosol	28.77	18.01
Bra002818.1-P	Field mustard	cytosol	40.82	17.41
Bra014307.1-P	Field mustard	cytosol	41.64	17.37
Bra025760.1-P	Field mustard	extracellular	28.22	16.97
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	6.03	14.77
Bra030402.1-P	Field mustard	cytosol	40.0	13.63
Bra018940.1-P	Field mustard	cytosol	41.92	12.98
Bra014231.1-P	Field mustard	cytosol	33.42	11.65

Protein Annotations

EnsemblPlants:Bra017083.1	EnsemblPlants:Bra017083.1-P	EnsemblPlantsGene:Bra017083	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915
SUPFAM:SSF51101	UniParc:UPI0002544B9D	UniProt:M4DKQ2	MapMan:35.1	:	:

Description

AT2G39310 (E=2e-149) JAL22 | JAL22 (JACALIN-RELATED LECTIN 22)

Coordinates

chrA04:-:16740990..16743295

Molecular Weight (calculated)

40727.2 Da

IEP (calculated)

5.541

GRAVY (calculated)

-0.395

Length

365 amino acids

Sequence
(BLAST)

001: MGKMCGGEGG REWDDDVYEG IRKVYVGQDL SRITYVKFEY VKEDGEVVTR EYGTITQDPK EFIIEYPDEH ITAVEGSYNK VALIATEVIT SLVFRTSKGR
101: TSPTFGPNLF GVVNGTKFKF EDEGKKIVGF HGRSDNAIDA LGVYLVLDSL TTPFPLYKLD AQGGTEGRVW DDGSFDGVRT LRICQDDHRI TYLEFEYDKG
201: GKSEKLYHGV KGGTPSELVV DYPNENIKLV EVTYDKPNLF QNTVITSLTF QTSSGRTSFF GYKVGKKFVL EQKDLRLVGF HGKEGDAIDA LGAYFAPVQA
301: PTPLIPTKKL PLVGGNGGVK WDDGVFDGVR KIYIGQIYDV VSYVKFDYIK GKEFTTRKQS IKDGN

Best Arabidopsis Sequence Match ( AT2G39310.1 )
(BLAST)

001: MAKMYRKLAL CGGEGGQEWD DDVYEGVRKV YVGQDLNRIT YIKFEYVQED GEVVTTEYGT TNQHPKEFVI QYPDEHIIAV EGSYHQVALI ATEVITSLVF
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE

Arabidopsis Description

JAL22Jacalin-related lectin 22 [Source:UniProtKB/Swiss-Prot;Acc:O80950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.