Factsheet for Bra013639.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79175	Canola	cytosol	60.91	96.38
CDY68611	Canola	cytosol	49.69	90.19
Bra013637.1-P	Field mustard	cytosol	76.92	79.06
AT5G46000.1	Thale cress	cytosol	44.7	54.29
Bra017082.1-P	Field mustard	cytosol	34.1	37.1
Bra021176.1-P	Field mustard	cytosol	35.55	36.62
Bra005053.1-P	Field mustard	cytosol	34.72	36.54
Bra017083.1-P	Field mustard	cytosol	27.44	36.16
Bra000129.1-P	Field mustard	cytosol	34.1	36.12
Bra021177.1-P	Field mustard	nucleus	21.41	34.56
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	12.89	33.16
Bra001632.1-P	Field mustard	cytosol	16.63	32.79
Bra001631.1-P	Field mustard	cytosol	20.17	32.66
Bra021179.1-P	Field mustard	cytosol	30.35	32.3
Bra022161.1-P	Field mustard	cytosol	30.15	32.22
Bra026177.1-P	Field mustard	cytosol	18.3	30.03
Bra018942.1-P	Field mustard	cytosol	22.66	28.68
Bra014306.1-P	Field mustard	cytosol	24.12	28.29
Bra018941.1-P	Field mustard	cytosol	25.36	28.18
Bra017017.1-P	Field mustard	cytosol	19.33	27.19
Bra023885.1-P	Field mustard	nucleus	29.11	25.93
Bra027095.1-P	Field mustard	cytosol	31.18	25.51
Bra022160.1-P	Field mustard	cytosol	32.22	23.0
Bra018945.1-P	Field mustard	cytosol	23.91	21.82
Bra014308.1-P	Field mustard	cytosol	32.02	21.01
Bra008068.1-P	Field mustard	cytosol	7.07	19.32
Bra014309.1-P	Field mustard	cytosol	33.47	18.85
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	5.82	18.79
Bra030443.1-P	Field mustard	cytosol	28.9	18.73
Bra016496.1-P	Field mustard	cytosol	22.25	18.35
Bra025760.1-P	Field mustard	extracellular	22.25	17.63
Bra002818.1-P	Field mustard	cytosol	29.11	16.36
Bra014307.1-P	Field mustard	cytosol	29.11	16.0
Bra030402.1-P	Field mustard	cytosol	28.9	12.98
Bra018940.1-P	Field mustard	cytosol	31.6	12.89
Bra014231.1-P	Field mustard	cytosol	26.2	12.03

Protein Annotations

EnsemblPlants:Bra013639.1	EnsemblPlants:Bra013639.1-P	EnsemblPlantsGene:Bra013639	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	SMART:SM00915	SUPFAM:SSF51101
UniParc:UPI000254574E	UniProt:M4DAX9	MapMan:35.1	:	:	:

Description

AT1G52030 (E=5e-054) MBP2, MBP1.2, F-ATMBP | MBP2 (MYROSINASE-BINDING PROTEIN 2); sugar binding / thioglucosidase binding

Coordinates

chrA01:+:6782989..6784750

Molecular Weight (calculated)

54004.1 Da

IEP (calculated)

5.273

GRAVY (calculated)

-0.507

Length

481 amino acids

Sequence
(BLAST)

001: MSTRSPVPTL SEQYHPFDDG VYDCVKKVII GEDTQGIAYI TIQYVRNGDV VQLEHGSERG AQITETEFEV KDPDEYITCI EGTCGEANFC DSPIALWTEK
101: FYHTVSEIQF TTSHGRTSPK IGCKPEADSF TFKLKGKNGT KLVGLHGKSG RFLEALKAYF VVVSSTLKQL EPQGRSDGHS WDDGAYDGLR KVCIGEDGGR
201: VSSVEFVYAK GNECITHCHG RHSNERKQFE LRYEDGEYII SFEGTTDKDG YISSLIFNTS MDRSSDEFGK AVANNEFFLK PRGFHKLVGF RGRSCVDRIN
301: ALGANFAVVL APPVKKLQAQ GTNDQGEEWD DGVHDNVRMI TVTYVYDCVV SVTFEYANGA ETVLGDPHGI LDDRHEKKEF KLCDNNEYIT SVEGFFGQKW
401: ISTQSAGDEF KSIYYNMKRL DFNTNIRTYS VMENNTRDGY LAVVPFKLEE KGHKIVGFRG KSTEFSLQQI GVYVKPIDDA N

Best Arabidopsis Sequence Match ( AT5G46000.1 )
(BLAST)

001: MSKKVTIAYG GSNGNKFDDG VYEGTYDGVR KLIVGEDFHG IVYLKIQYVK NGDVVVKEHG RARGTHITET EFEVKCPDEY ITSIWGTCRN DHHRYKSTGG
101: RTFEQLTAAD KYDINLAAKM GTPMYWNTVS ELQFKTSHGR TSEQFRMPGT GGSNGVSWDD GAYDRLSKLC VGEDAHCVSS VEFHYVKGND RITHCHGKDS
201: KEHDKDGFIS SLTFKTSMNR SSEKFGKPVG TKFQLEAKGF DKIVGFRGRS SVNRINALGA NFAVVVVPPV KKLNAKGGVL GNEWDDGIHD DARMITFKLY
301: FNKEYITSVE GHYGKRLAAP NASASAMSSF FTGYMTMLKF NTNRTTYQVL SHSPEYTYEG TSFKLEEKDH KIVGFYGKTE VSLNQIGVYV KPIANA

Arabidopsis Description

JAL45Jacalin-related lectin 45 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.