Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68611 | Canola | cytosol | 81.91 | 93.96 |
| Bra013639.1-P | Field mustard | cytosol | 96.38 | 60.91 |
| CDX82963 | Canola | cytosol | 75.0 | 54.42 |
| CDY70857 | Canola | cytosol | 74.34 | 53.94 |
| CDY06998 | Canola | cytosol | 24.34 | 35.58 |
| CDX93274 | Canola | cytosol | 24.67 | 33.33 |
| AT5G46000.1 | Thale cress | cytosol | 42.43 | 32.58 |
| CDY54394 | Canola | cytosol | 10.53 | 32.0 |
| CDY21999 | Canola | extracellular | 16.45 | 28.9 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 18.09 | 26.32 |
| CDX90860 | Canola | cytosol | 32.89 | 25.91 |
| CDY45640 | Canola | cytosol | 25.66 | 25.41 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 27.96 | 23.55 |
| CDY07000 | Canola | cytosol | 34.21 | 23.53 |
| CDX93273 | Canola | cytosol | 35.2 | 23.46 |
| CDY38589 | Canola | cytosol | 34.54 | 22.93 |
| CDY20195 | Canola | cytosol | 31.58 | 22.64 |
| CDX74856 | Canola | cytosol | 33.55 | 22.17 |
| CDY59556 | Canola | cytosol | 32.57 | 22.15 |
| CDY07657 | Canola | cytosol | 32.89 | 22.03 |
| CDY24969 | Canola | cytosol | 32.89 | 22.03 |
| CDY72239 | Canola | cytosol | 21.05 | 20.58 |
| CDY45301 | Canola | cytosol | 19.74 | 20.48 |
| CDY53520 | Canola | cytosol | 19.41 | 20.14 |
| CDY20197 | Canola | cytosol | 13.49 | 19.9 |
| CDX93275 | Canola | cytosol | 28.29 | 19.2 |
| CDX82402 | Canola | cytosol, plasma membrane | 18.75 | 19.19 |
| CDY02548 | Canola | cytosol | 27.3 | 19.08 |
| CDY06997 | Canola | cytosol | 27.96 | 18.97 |
| CDX82401 | Canola | cytosol | 16.45 | 18.8 |
| CDX77840 | Canola | cytosol | 5.59 | 17.89 |
| CDY70821 | Canola | cytosol | 25.66 | 17.41 |
| CDY06999 | Canola | cytosol | 17.11 | 16.35 |
| CDY65744 | Canola | peroxisome | 14.8 | 15.85 |
| CDY32783 | Canola | cytosol | 26.97 | 15.68 |
| CDY47758 | Canola | cytosol | 27.3 | 15.63 |
| CDX92074 | Canola | cytosol | 32.89 | 15.38 |
| CDY60590 | Canola | cytosol | 29.61 | 15.38 |
| CDY69096 | Canola | cytosol | 29.61 | 15.38 |
| CDY13177 | Canola | extracellular | 15.79 | 15.19 |
| CDY22879 | Canola | cytosol | 21.05 | 14.78 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 7.24 | 14.77 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 26.32 | 14.21 |
| CDY43099 | Canola | cytosol | 31.58 | 14.18 |
| CDY40959 | Canola | cytosol | 22.7 | 13.53 |
| CDX75882 | Canola | cytosol | 12.5 | 13.29 |
| CDY28362 | Canola | cytosol, nucleus, plastid | 9.21 | 12.9 |
| CDY28360 | Canola | cytosol | 6.91 | 12.35 |
| CDY43910 | Canola | cytosol | 29.93 | 12.26 |
| CDY46535 | Canola | cytosol | 14.8 | 11.69 |
| CDY53442 | Canola | cytosol | 15.13 | 11.65 |
| CDY63700 | Canola | cytosol | 21.71 | 11.28 |
| CDX96652 | Canola | extracellular | 22.04 | 10.89 |
| CDY59365 | Canola | cytosol | 26.64 | 10.15 |
| CDY02564 | Canola | cytosol | 27.63 | 8.97 |
| CDY51196 | Canola | cytosol | 27.3 | 8.92 |
| CDY22878 | Canola | cytosol | 28.29 | 8.76 |
| CDY51197 | Canola | cytosol | 25.66 | 8.69 |
| CDX87871 | Canola | cytosol | 25.33 | 8.38 |
| CDY02563 | Canola | cytosol, extracellular | 27.63 | 7.92 |
| CDY51195 | Canola | cytosol, extracellular | 27.3 | 7.8 |
| CDY47825 | Canola | cytosol | 16.45 | 6.31 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 2.63 | 3.48 |
| CDX82115 | Canola | extracellular | 2.63 | 3.2 |
| CDY47824 | Canola | cytosol | 1.97 | 1.68 |
| CDY43090 | Canola | cytosol | 0.99 | 1.08 |
| CDY34134 | Canola | cytosol | 0.33 | 0.48 |
Protein Annotations
| EnsemblPlants:CDX79175 | EnsemblPlantsGene:GSBRNA2T00131741001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | PFAM:PF01419 | PFscan:PS51752 | ProteinID:CDX79175 | ProteinID:CDX79175.1 | SMART:SM00915 |
| SUPFAM:SSF51101 | UniParc:UPI0004EEF0FC | MapMan:35.1 | : | : | : |
Description
BnaA01g12420D
Coordinates
chrLK031816:+:2160388..2161579
Molecular Weight (calculated)
34527.1 Da
IEP (calculated)
4.800
GRAVY (calculated)
-0.666
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MERSLLGSME NLDQLEPQGR SDGHSWDDGA YDGLRKVCIG EDGGRVSSVE FVYAKGNECI THCHGRHSNE RKQFELRYED GEYIISFEGT TDKDGYISSL
101: IFNTSMDRSS DEFGKAVANN EFFLKPRGFH KLVAPPVKKL QAQGTNDQGE EWDDGVHDNV RMITVTYVYD CVVSVTFEYA NGAETVLGDP HGILDDRHEK
201: KEFKLCDNNE YITSVEGFFG QKWISTQSAG DEFKSIYYNM KRLDFNTNIR TYSVMENNTR DGYLAVVPFK LEEKGHKIVG FRGKSTEFSL QQIGVYVKPI
301: DDAN
101: IFNTSMDRSS DEFGKAVANN EFFLKPRGFH KLVAPPVKKL QAQGTNDQGE EWDDGVHDNV RMITVTYVYD CVVSVTFEYA NGAETVLGDP HGILDDRHEK
201: KEFKLCDNNE YITSVEGFFG QKWISTQSAG DEFKSIYYNM KRLDFNTNIR TYSVMENNTR DGYLAVVPFK LEEKGHKIVG FRGKSTEFSL QQIGVYVKPI
301: DDAN
001: MSKKVTIAYG GSNGNKFDDG VYEGTYDGVR KLIVGEDFHG IVYLKIQYVK NGDVVVKEHG RARGTHITET EFEVKCPDEY ITSIWGTCRN DHHRYKSTGG
101: RTFEQLTAAD KYDINLAAKM GTPMYWNTVS ELQFKTSHGR TSEQFRMPGT GGSNGVSWDD GAYDRLSKLC VGEDAHCVSS VEFHYVKGND RITHCHGKDS
201: KEHDKDGFIS SLTFKTSMNR SSEKFGKPVG TKFQLEAKGF DKIVGFRGRS SVNRINALGA NFAVVVVPPV KKLNAKGGVL GNEWDDGIHD DARMITFKLY
301: FNKEYITSVE GHYGKRLAAP NASASAMSSF FTGYMTMLKF NTNRTTYQVL SHSPEYTYEG TSFKLEEKDH KIVGFYGKTE VSLNQIGVYV KPIANA
101: RTFEQLTAAD KYDINLAAKM GTPMYWNTVS ELQFKTSHGR TSEQFRMPGT GGSNGVSWDD GAYDRLSKLC VGEDAHCVSS VEFHYVKGND RITHCHGKDS
201: KEHDKDGFIS SLTFKTSMNR SSEKFGKPVG TKFQLEAKGF DKIVGFRGRS SVNRINALGA NFAVVVVPPV KKLNAKGGVL GNEWDDGIHD DARMITFKLY
301: FNKEYITSVE GHYGKRLAAP NASASAMSSF FTGYMTMLKF NTNRTTYQVL SHSPEYTYEG TSFKLEEKDH KIVGFYGKTE VSLNQIGVYV KPIANA
Arabidopsis Description
JAL45Jacalin-related lectin 45 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.