CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027095.1-P	Field mustard	cytosol	98.63	85.54
AT1G57570.1	Thale cress	mitochondrion	72.16	59.93
CDY54394	Canola	cytosol	10.59	54.0
CDY34134	Canola	cytosol	20.2	49.52
CDY69096	Canola	cytosol	55.88	48.72
CDY60590	Canola	cytosol	55.69	48.55
CDY47824	Canola	cytosol	31.18	44.54
CDX90860	Canola	cytosol	33.33	44.04
CDX82402	Canola	cytosol, plasma membrane	24.9	42.76
CDY02548	Canola	cytosol	35.69	41.84
CDX82401	Canola	cytosol	21.76	41.73
CDY13177	Canola	extracellular	24.9	40.19
CDY43910	Canola	cytosol	54.51	37.47
CDX75882	Canola	cytosol	19.41	34.62
CDY28362	Canola	cytosol, nucleus, plastid	14.51	34.1
CDY06999	Canola	cytosol	21.18	33.96
CDX74856	Canola	cytosol	29.8	33.04
CDY24969	Canola	cytosol	28.43	31.94
CDY07657	Canola	cytosol	28.24	31.72
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	12.94	31.58
CDY38589	Canola	cytosol	28.24	31.44
CDY43090	Canola	cytosol	17.06	31.41
CDY28360	Canola	cytosol	10.39	31.18
CDY20195	Canola	cytosol	25.88	31.13
CDX93273	Canola	cytosol	27.65	30.92
CDY06997	Canola	cytosol	26.67	30.36
CDX92074	Canola	cytosol	38.63	30.31
CDY59556	Canola	cytosol	26.47	30.2
CDY07000	Canola	cytosol	25.88	29.86
CDY22879	Canola	cytosol	24.51	28.87
CDX93275	Canola	cytosol	25.29	28.79
CDY53520	Canola	cytosol	16.47	28.67
CDY43099	Canola	cytosol	37.65	28.36
CDY45301	Canola	cytosol	16.27	28.33
CDY21999	Canola	extracellular	9.61	28.32
CDY44637	Canola	cytosol, mitochondrion, plastid	19.61	27.7
CDX93274	Canola	cytosol	12.16	27.56
CDY65744	Canola	peroxisome	15.29	27.46
CDX77840	Canola	cytosol	5.1	27.37
CDY68611	Canola	cytosol	13.53	26.04
CDX82963	Canola	cytosol	21.18	25.78
CDY70857	Canola	cytosol	21.18	25.78
CDY46535	Canola	cytosol	19.41	25.71
CDY53442	Canola	cytosol	19.61	25.32
CDY20197	Canola	cytosol	10.2	25.24
CDY32783	Canola	cytosol	25.88	25.24
CDY47758	Canola	cytosol	25.69	24.67
CDY06998	Canola	cytosol	10.0	24.52
CDY45640	Canola	cytosol	14.12	23.45
CDX79175	Canola	cytosol	13.53	22.7
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	23.53	21.31
CDY59365	Canola	cytosol	30.39	19.42
CDY48032	Canola	cytosol, extracellular, nucleus	8.63	19.13
CDY72239	Canola	cytosol	11.37	18.65
CDX82115	Canola	extracellular	9.02	18.4
CDY63700	Canola	cytosol	20.59	17.95
CDX96652	Canola	extracellular	20.98	17.4
CDX87871	Canola	cytosol	28.82	16.0
CDY22878	Canola	cytosol	30.59	15.89
CDY70821	Canola	cytosol	13.53	15.4
CDY02564	Canola	cytosol	27.45	14.96
CDY51196	Canola	cytosol	27.06	14.84
CDY51197	Canola	cytosol	26.08	14.81
CDY47825	Canola	cytosol	20.39	13.11
CDY51195	Canola	cytosol, extracellular	27.25	13.06
CDY02563	Canola	cytosol, extracellular	27.06	13.02
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	1.76	6.04

Protein Annotations

EnsemblPlants:CDY40959	EnsemblPlantsGene:GSBRNA2T00072202001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	ProteinID:CDY40959	ProteinID:CDY40959.1	SEG:seg
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EE5DC3	UniProt:A0A078HUB8	MapMan:35.1	:

Description

BnaCnng10020DBnaCnng10020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUB8]

Coordinates

chrLK032486:-:129355..131879

Molecular Weight (calculated)

57442.7 Da

IEP (calculated)

7.000

GRAVY (calculated)

-0.409

Length

510 amino acids

Sequence
(BLAST)

001: MAQKLEAIGS TNGFTFDDGS DHYGVSKIFV GGGLQGILYM EFEYVRSGQL KFGSLVGRRH RGFIETFEIN HVKNEHLESV EGYYDHESGY IQGLQFKTNF
101: RVSELIGYEK GNKFTLEVKG KKISGFHGYM RKRNIIALGA YFTMILPSRL DVKGGKGGHQ WDDGANHDGV TKIHVRGGFD GIQYIKFNYV KNGETQDGPI
201: HGISGSGFTQ TFEINHFNDE HLVYVEGYYD DASGVIQALQ FKTNLKTSDV LGYEKGKKFL LADKGKKIIG FHGYAEKNLN SLGAYFTTVS LTKSERHGGS
301: EGAYWDDGVF ESVRTVYVSY DTNNVKSITF HYHNRTVIER QHGWQTIQDD LEEEEFELDY PNEVITYVEG TFKRFGPGKT RVTSLIFKSS EGRTSPSFGV
401: VYGTKFVLEK KGCAVVGFHG RHDDRDLFEL EYPSEYITAV DGCYDKVIGS EVEVITMLRF TTNKRTSIPV GFVSTSSFLL YKDGFKIVGF HGKSSNMINQ
501: LGVHVLPFTY

Best Arabidopsis Sequence Match ( AT1G57570.1 )
(BLAST)

001: MERNLLSILM RRRLAERNRD AIELAAVQKM EVIGSTEGYT FDDGSDHDDV TKIFVGGGRQ GIHYIEFEYV KNGQLESGVH LGVRYRGFTE TFEINHLNNE
101: HLESVEGYYD YGSGYIQGLQ FKTNFRVSEL IGYDEGTKFS LSVKGKRIIG FHGYMKERKI ISLGGYFSWI HPRKMEAKGS KGGNQWDDGT NNDGVTKIHV
201: RGGVEGIQYI KFDYVRKSGQ HINGSIHGLS GSGFTQTFEI DHLNNEHLVC VEGYYDDESG VIQALQFKTN IKTSELLGYK KGKKFSLVDK RKKIVGFHGY
301: ADKNLNSLGA YFTTVSPTKS ECYGSSKGIY WDDGVFDFIR TVYVSSNVMN VRYIKFHYYN RAVVVRQHGW NSIVEEDGEK EFELDYPNEL ITSVEGTMKS
401: FSRSEIRISS LTFKTSKGRT SPTIGIASGT KFLLASKGCA VVGFYGRHDD RDLVAIGAYF SPLPPPTAEK LQAQGGNQGD SWDDGVFEGV RKLYVGQGKN
501: CVAFLKVVYD SNTQVVIGED HGNKTLFEVK EYELEYPSEY ITAVDGCYNK VNGTEVEVIT MLRIQTNKRT SIPVGCESNS SFVLKKEGYK IVGFHGKASN
601: MINQLGVHVV PLTE

Arabidopsis Description

JAL14Jacalin-related lectin 14 [Source:UniProtKB/Swiss-Prot;Acc:F4I837]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.