CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021176.1-P	Field mustard	cytosol	100.0	90.79
CDY06998	Canola	cytosol	24.53	50.0
CDY54394	Canola	cytosol	11.79	50.0
CDX93274	Canola	cytosol	24.53	46.22
CDX82402	Canola	cytosol, plasma membrane	30.19	43.1
CDY45301	Canola	cytosol	29.72	43.0
CDY53520	Canola	cytosol	29.72	43.0
CDX74856	Canola	cytosol	46.23	42.61
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	20.52	41.63
CDY24969	Canola	cytosol	43.4	40.53
CDY07657	Canola	cytosol	43.4	40.53
CDX82401	Canola	cytosol	25.24	40.23
CDY59556	Canola	cytosol	41.98	39.82
CDX90860	Canola	cytosol	36.08	39.64
CDY65744	Canola	peroxisome	26.42	39.44
CDY21999	Canola	extracellular	16.04	39.31
CDY38589	Canola	cytosol	42.22	39.08
CDX77840	Canola	cytosol	8.73	38.95
CDY20197	Canola	cytosol	18.87	38.84
CDY22879	Canola	cytosol	39.15	38.34
CDY07000	Canola	cytosol	39.86	38.24
CDX93273	Canola	cytosol	41.04	38.16
CDY46535	Canola	cytosol	34.43	37.92
CDY06997	Canola	cytosol	39.62	37.5
CDY44637	Canola	cytosol, mitochondrion, plastid	31.84	37.4
CDY53442	Canola	cytosol	34.67	37.22
CDY28360	Canola	cytosol	14.86	37.06
CDX93275	Canola	cytosol	39.15	37.05
CDY32783	Canola	cytosol	45.52	36.9
CDY28362	Canola	cytosol, nucleus, plastid	18.87	36.87
CDY47758	Canola	cytosol	45.99	36.72
CDX82963	Canola	cytosol	35.38	35.8
CDY70857	Canola	cytosol	35.38	35.8
CDY02548	Canola	cytosol	35.85	34.94
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	44.81	33.75
CDY06999	Canola	cytosol	25.0	33.33
CDY13177	Canola	extracellular	24.76	33.23
CDY45640	Canola	cytosol	24.06	33.22
CDY68611	Canola	cytosol	19.81	31.7
CDX79175	Canola	cytosol	22.64	31.58
CDX75882	Canola	cytosol	21.23	31.47
CDY60590	Canola	cytosol	40.09	29.06
CDY69096	Canola	cytosol	39.86	28.89
CDY72239	Canola	cytosol	20.05	27.33
CDX92074	Canola	cytosol	40.57	26.46
CDY40959	Canola	cytosol	31.13	25.88
CDY43099	Canola	cytosol	40.09	25.11
CDY43910	Canola	cytosol	40.8	23.32
CDY51197	Canola	cytosol	49.29	23.27
CDY02564	Canola	cytosol	50.94	23.08
CDY51196	Canola	cytosol	50.0	22.8
CDY63700	Canola	cytosol	29.72	21.54
CDY70821	Canola	cytosol	22.41	21.21
CDY02563	Canola	cytosol, extracellular	51.89	20.75
CDX96652	Canola	extracellular	29.95	20.65
CDY51195	Canola	cytosol, extracellular	51.42	20.49
CDX87871	Canola	cytosol	41.04	18.93
CDY47825	Canola	cytosol	35.14	18.79
CDY22878	Canola	cytosol	41.98	18.13
CDY59365	Canola	cytosol	31.6	16.79
CDY48032	Canola	cytosol, extracellular, nucleus	8.73	16.09
CDX82115	Canola	extracellular	8.96	15.2
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	5.19	14.77
CDY43090	Canola	cytosol	8.96	13.72
CDY47824	Canola	cytosol	9.91	11.76
CDY34134	Canola	cytosol	2.36	4.81

Protein Annotations

EnsemblPlants:CDY20195	EnsemblPlantsGene:GSBRNA2T00010070001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	ProteinID:CDY20195	ProteinID:CDY20195.1	SEG:seg
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EE2402	UniProt:A0A078G0W1	MapMan:35.1	:

Description

BnaA01g28070DBnaA01g28070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0W1]

Coordinates

chrLK032103:+:672334..674492

Molecular Weight (calculated)

45756.9 Da

IEP (calculated)

6.888

GRAVY (calculated)

-0.300

Length

424 amino acids

Sequence
(BLAST)

001: MAQKVGPFGG NKGDTFDDGV LGYTGVKKVI VGENGNGVDC IKIEYEKDGT FETQMHGSVT GILKEFELNY PDEYITSIQG TYSNVARYNT TIVKTLTFKT
101: SHGRTSPMFG NTAIFSTDFV MEGKAGAKLI GFHGRSGSAL DAIGAHFFAS ASPLKHIEPR GGFGGNAWDD GVYDGVRKIS VGLNCGNISY VRFKYVKGST
201: SVRHSHGKMS EEPKEFKVDY PNEYVTSVEG TYNFCGDVTS LTFKTSKGRV STGFGRASAL GAHFAPPVSA TVAPVPTPKL EAKGGDHGAA WDDGFYEDVR
301: KIYVGQGESG VSFIKFDYDV GKKLVAGDGH GKMSLLGTEE FELDFPNEYI VSVDGCYDKV FGIEAEVVTM VKFKTNKRTS PPFGMDGGTT FVFEMKDHKI
401: VGFHGKAGDY VHQVGVHVSP ISKS

Best Arabidopsis Sequence Match ( AT1G52030.1 )
(BLAST)

001: MSEKVGAMGG NKGGAFDDGV FDGVKKVIVG KDFNNVTYIK VEYEKDGKFE IREHGTNRGQ LKEFSVDYPN EYITAVGGSY DTVFGYGSAL IKSLLFKTSY
101: GRTSPILGHT TLLGNPAGKE FMLESKYGGK LLGFHGRSGE ALDAIGPHFF AVNSSLKHFK PQGGNGGSAW DDGAFDGVRK VLVGRNGKFV SYVRFEYAKG
201: ERMVPHAHGK RQEAPQEFVV DYPNEHITSV EGTIDGYLSS LKFTTSKGRT SPVFGNVVGS KFVFEETSFK LVGFCGRSGE AIDALGAHFA PLPAPTPAPA
301: PAPAPAPAPA PSPAPASAPV PAPAPTPAPA PAPPNKVEAL GGNGGTIFDD GAFDHVRKVY IGQGDSGVAY VKFEYRKDGK RETREHGKMT VLGTEEFEVE
401: SDDYITSIEV SVDNVFGFKS EIVTSLVFKT FKGITSQPFG METEKKLELK DGKGGKLVGF HGKASDVLYA LGAYFAPTTN STTPSTPSTS KKLQARGGNG
501: GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DRHGKQTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV VTSLTFKTNK RTSQPFGMTA
601: GEHFELNEDG YKIVGFHGKA GDLVHQIGVH AVPIFTNYRC VF

Arabidopsis Description

F-ATMBPMyrosinase-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.