Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02564 | Canola | cytosol | 97.31 | 96.69 |
| CDY51197 | Canola | cytosol | 82.69 | 85.63 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 47.63 | 78.69 |
| CDY51195 | Canola | cytosol, extracellular | 87.85 | 76.79 |
| CDY02563 | Canola | cytosol, extracellular | 87.31 | 76.6 |
| CDY47825 | Canola | cytosol | 60.32 | 70.74 |
| CDY46535 | Canola | cytosol | 28.39 | 68.57 |
| CDY53442 | Canola | cytosol | 29.03 | 68.35 |
| CDY32783 | Canola | cytosol | 38.06 | 67.69 |
| CDY47758 | Canola | cytosol | 38.06 | 66.67 |
| CDY22879 | Canola | cytosol | 30.22 | 64.9 |
| AT1G52030.2 | Thale cress | cytosol | 42.9 | 62.15 |
| CDY65744 | Canola | peroxisome | 17.85 | 58.45 |
| CDY20195 | Canola | cytosol | 22.8 | 50.0 |
| CDX74856 | Canola | cytosol | 20.97 | 42.39 |
| CDY07657 | Canola | cytosol | 20.32 | 41.63 |
| CDY24969 | Canola | cytosol | 20.11 | 41.19 |
| CDX93274 | Canola | cytosol | 9.89 | 40.89 |
| CDX90860 | Canola | cytosol | 16.88 | 40.67 |
| CDX93273 | Canola | cytosol | 19.57 | 39.91 |
| CDY06999 | Canola | cytosol | 13.55 | 39.62 |
| CDY06997 | Canola | cytosol | 19.03 | 39.51 |
| CDX93275 | Canola | cytosol | 19.03 | 39.51 |
| CDY70821 | Canola | cytosol | 18.92 | 39.29 |
| CDY07000 | Canola | cytosol | 18.39 | 38.69 |
| CDY54394 | Canola | cytosol | 4.09 | 38.0 |
| CDY06998 | Canola | cytosol | 8.49 | 37.98 |
| CDY38589 | Canola | cytosol | 18.28 | 37.12 |
| CDY20197 | Canola | cytosol | 8.17 | 36.89 |
| CDX82401 | Canola | cytosol | 10.54 | 36.84 |
| CDY59556 | Canola | cytosol | 17.63 | 36.69 |
| CDX82402 | Canola | cytosol, plasma membrane | 11.61 | 36.36 |
| CDY02548 | Canola | cytosol | 16.45 | 35.17 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 13.55 | 34.9 |
| CDY45640 | Canola | cytosol | 11.51 | 34.85 |
| CDY28360 | Canola | cytosol | 6.13 | 33.53 |
| CDY70857 | Canola | cytosol | 15.05 | 33.41 |
| CDY13177 | Canola | extracellular | 11.29 | 33.23 |
| CDX82963 | Canola | cytosol | 14.84 | 32.94 |
| CDY53520 | Canola | cytosol | 10.32 | 32.76 |
| CDY45301 | Canola | cytosol | 10.32 | 32.76 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 7.1 | 31.58 |
| CDY28362 | Canola | cytosol, nucleus, plastid | 7.31 | 31.34 |
| CDY21999 | Canola | extracellular | 5.7 | 30.64 |
| CDY72239 | Canola | cytosol | 10.11 | 30.23 |
| CDY68611 | Canola | cytosol | 8.49 | 29.81 |
| CDX75882 | Canola | cytosol | 9.03 | 29.37 |
| CDX77840 | Canola | cytosol | 2.9 | 28.42 |
| CDY22878 | Canola | cytosol | 29.46 | 27.9 |
| CDX79175 | Canola | cytosol | 8.92 | 27.3 |
| CDY60590 | Canola | cytosol | 17.1 | 27.18 |
| CDY40959 | Canola | cytosol | 14.84 | 27.06 |
| CDY69096 | Canola | cytosol | 16.99 | 27.01 |
| CDX92074 | Canola | cytosol | 17.63 | 25.23 |
| CDY43099 | Canola | cytosol | 17.42 | 23.93 |
| CDY63700 | Canola | cytosol | 14.95 | 23.76 |
| CDX96652 | Canola | extracellular | 15.05 | 22.76 |
| CDY43910 | Canola | cytosol | 18.06 | 22.64 |
| CDX87871 | Canola | cytosol | 21.61 | 21.87 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 3.44 | 21.48 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 5.27 | 21.3 |
| CDY59365 | Canola | cytosol | 17.2 | 20.05 |
| CDX82115 | Canola | extracellular | 5.05 | 18.8 |
| CDY47824 | Canola | cytosol | 5.7 | 14.85 |
| CDY43090 | Canola | cytosol | 4.41 | 14.8 |
| CDY34134 | Canola | cytosol | 1.29 | 5.77 |
Protein Annotations
| Gene3D:2.100.10.30 | Gene3D:2.120.10.80 | MapMan:9.5.2.2 | UniProt:A0A078IMI1 | EnsemblPlants:CDY51196 | ProteinID:CDY51196 |
| ProteinID:CDY51196.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0030246 | EnsemblPlantsGene:GSBRNA2T00098411001 |
| InterPro:IPR001229 | InterPro:IPR015915 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf |
| InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF01344 | PFAM:PF01419 | PFAM:PF13964 | PFscan:PS51752 |
| PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | SMART:SM00612 | SMART:SM00915 | SUPFAM:SSF117281 | SUPFAM:SSF51101 |
| UniParc:UPI0004EE0767 | SEG:seg | : | : | : | : |
Description
BnaC03g68960DBnaC03g68960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMI1]
Coordinates
chrLK032974:+:76111..79890
Molecular Weight (calculated)
101071.0 Da
IEP (calculated)
7.196
GRAVY (calculated)
-0.332
Length
930 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTMSEKVGA VGGNKGGPFD DGVFDGVKKI TVGKDWDCVS YIKIEYEKDG KFETREHGTI RGELQEFTVD YPNEYITSVG GSYEHVLSYG TVLIKSLRFK
101: TSYGRTSPIL GHTTLFGNPA GREFMLEGKN GGKLLGFHGR SGQALDAIGP HFFAVKSPLK HYNRQGGNGG SAWDDGAFDG VRKILVGRGG KFVSYVRFEY
201: ATGQGMVPHA HGKRQEVPQE FVVDYPDEHI ALVEGTIDGY LTSLRFKTSK GRTSPAFGNV AGRKFVFEEK DFKLVGFCGR SGDAIDAIGA HFAPLPPPPP
301: APTPAPTPAP TPAPTTTTKM GPLGGNKGNT FDDGILDGVK KIIIAADEYS ITYIKIEYEK DGKVEIREHG TNRGELKEFS VAYPNEYITA VGGSYKHIFN
401: YDTTLITSLY FTTSKGFTSP LFGEMKGTEF EFKGENGGKL VGFHGRGGYA IDAIGAHFAQ ATTSSSSSLI KVEAVGGKGE VTFDDGSFDH VRKVFVGQGN
501: SGVSYIKFEY EKDGRIVTHE HGQKTSLGTE EFEVGQGDDI TSVKVYYDKL YGSKAEIITS LTFKTLKGIT SQPFGMTSAN LSLLEGGKIT GFHGSSTDVL
601: HSIGAYISAS PRTMLHGKWY QVEQKGKTPG PRCSHAIAMV GSKMYAFGGE LTPNFHIDRH LYFFDFKTHR WSVADPDGGV PELPCLGVCM VAIGTTLYVF
701: GGRDGHRNYN GFYSYDTVKS EWKLITHVNK GPAPRSFHSM AADDKNIYVF GGVSTTVRVN TLHAYSIIDQ KWTELPNPGE SCKGRGGAGL AVVHGKIWVV
801: YGFIGDEVDD VHCFDPVENK WTKVETRGEK PWARSVFALA VVGKYIIISG GEIEMDPKAH LGPGKLAGGT FVLDTESLLW EKLEEGHSPR GWMASTTASI
901: DGKKGLLMYG GKAPTNGRYE DIFFYGVDSA
101: TSYGRTSPIL GHTTLFGNPA GREFMLEGKN GGKLLGFHGR SGQALDAIGP HFFAVKSPLK HYNRQGGNGG SAWDDGAFDG VRKILVGRGG KFVSYVRFEY
201: ATGQGMVPHA HGKRQEVPQE FVVDYPDEHI ALVEGTIDGY LTSLRFKTSK GRTSPAFGNV AGRKFVFEEK DFKLVGFCGR SGDAIDAIGA HFAPLPPPPP
301: APTPAPTPAP TPAPTTTTKM GPLGGNKGNT FDDGILDGVK KIIIAADEYS ITYIKIEYEK DGKVEIREHG TNRGELKEFS VAYPNEYITA VGGSYKHIFN
401: YDTTLITSLY FTTSKGFTSP LFGEMKGTEF EFKGENGGKL VGFHGRGGYA IDAIGAHFAQ ATTSSSSSLI KVEAVGGKGE VTFDDGSFDH VRKVFVGQGN
501: SGVSYIKFEY EKDGRIVTHE HGQKTSLGTE EFEVGQGDDI TSVKVYYDKL YGSKAEIITS LTFKTLKGIT SQPFGMTSAN LSLLEGGKIT GFHGSSTDVL
601: HSIGAYISAS PRTMLHGKWY QVEQKGKTPG PRCSHAIAMV GSKMYAFGGE LTPNFHIDRH LYFFDFKTHR WSVADPDGGV PELPCLGVCM VAIGTTLYVF
701: GGRDGHRNYN GFYSYDTVKS EWKLITHVNK GPAPRSFHSM AADDKNIYVF GGVSTTVRVN TLHAYSIIDQ KWTELPNPGE SCKGRGGAGL AVVHGKIWVV
801: YGFIGDEVDD VHCFDPVENK WTKVETRGEK PWARSVFALA VVGKYIIISG GEIEMDPKAH LGPGKLAGGT FVLDTESLLW EKLEEGHSPR GWMASTTASI
901: DGKKGLLMYG GKAPTNGRYE DIFFYGVDSA
001: MSEKVGAMGG NKGGAFDDGV FDGVKKVIVG KDFNNVTYIK VEYEKDGKFE IREHGTNRGQ LKEFSVDYPN EYITAVGGSY DTVFGYGSAL IKSLLFKTSY
101: GRTSPILGHT TLLGNPAGKE FMLESKYGGK LLGFHGRSGE ALDAIGPHFF AVNSSLKHFK PQGGNGGSAW DDGAFDGVRK VLVGRNGKFV SYVRFEYAKG
201: ERMVPHAHGK RQEAPQEFVV DYPNEHITSV EGTIDGYLSS LKFTTSKGRT SPVFGNVVGS KFVFEETSFK LVGFCGRSGE AIDALGAHFA PLPAPTPAPA
301: PAPAPAPAPA PSPAPASAPV PAPAPTPAPA PAPPNKVEAL GGNGGTIFDD GAFDHVRKVY IGQGDSGVAY VKFEYRKDGK RETREHGKMT VLGTEEFEVE
401: SDDYITSIEV SVDNVFGFKS EIVTSLVFKT FKGITSQPFG METEKKLELK DGKGGKLVGF HGKASDVLYA LGAYFAPTTN STTPSTPSTS KKLQARGGNG
501: GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DRHGKQTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV VTSLTFKTNK RTSQPFGMTA
601: GEHFELNEDG YKIVGFHGKA GDLVHQIGVH AVPIFTNYRC VF
101: GRTSPILGHT TLLGNPAGKE FMLESKYGGK LLGFHGRSGE ALDAIGPHFF AVNSSLKHFK PQGGNGGSAW DDGAFDGVRK VLVGRNGKFV SYVRFEYAKG
201: ERMVPHAHGK RQEAPQEFVV DYPNEHITSV EGTIDGYLSS LKFTTSKGRT SPVFGNVVGS KFVFEETSFK LVGFCGRSGE AIDALGAHFA PLPAPTPAPA
301: PAPAPAPAPA PSPAPASAPV PAPAPTPAPA PAPPNKVEAL GGNGGTIFDD GAFDHVRKVY IGQGDSGVAY VKFEYRKDGK RETREHGKMT VLGTEEFEVE
401: SDDYITSIEV SVDNVFGFKS EIVTSLVFKT FKGITSQPFG METEKKLELK DGKGGKLVGF HGKASDVLYA LGAYFAPTTN STTPSTPSTS KKLQARGGNG
501: GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DRHGKQTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV VTSLTFKTNK RTSQPFGMTA
601: GEHFELNEDG YKIVGFHGKA GDLVHQIGVH AVPIFTNYRC VF
Arabidopsis Description
F-ATMBPMyrosinase-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.