CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92074	Canola	cytosol	88.18	91.85
CDY43090	Canola	cytosol	29.25	71.48
CDX82402	Canola	cytosol, plasma membrane	27.62	62.96
CDY28362	Canola	cytosol, nucleus, plastid	18.61	58.06
CDX82401	Canola	cytosol	22.6	57.52
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	17.58	56.94
CDY54394	Canola	cytosol	7.68	52.0
CDX75882	Canola	cytosol	20.53	48.6
CDX77840	Canola	cytosol	6.65	47.37
CDY20197	Canola	cytosol	14.03	46.12
CDX90860	Canola	cytosol	26.29	46.11
CDY06998	Canola	cytosol	13.74	44.71
CDX93274	Canola	cytosol	14.62	44.0
CDY21999	Canola	extracellular	11.23	43.93
CDY07657	Canola	cytosol	28.07	41.85
CDY53520	Canola	cytosol	18.02	41.64
CDY24969	Canola	cytosol	27.92	41.63
CDY45301	Canola	cytosol	17.87	41.3
CDX74856	Canola	cytosol	27.92	41.09
CDY20195	Canola	cytosol	25.11	40.09
CDY59556	Canola	cytosol	26.29	39.82
CDX93273	Canola	cytosol	26.74	39.69
CDY28360	Canola	cytosol	9.9	39.41
CDY02548	Canola	cytosol	25.11	39.08
CDY07000	Canola	cytosol	25.41	38.91
CDY60590	Canola	cytosol	33.23	38.46
CDY69096	Canola	cytosol	32.94	38.12
CDY13177	Canola	extracellular	17.73	37.97
CDY40959	Canola	cytosol	28.36	37.65
CDY38589	Canola	cytosol	25.41	37.55
CDY59365	Canola	cytosol	44.17	37.47
CDY44637	Canola	cytosol, mitochondrion, plastid	19.2	36.01
CDY06997	Canola	cytosol	23.63	35.71
CDX93275	Canola	cytosol	23.63	35.71
CDY22879	Canola	cytosol	22.6	35.33
CDY43910	Canola	cytosol	38.26	34.91
CDY65744	Canola	peroxisome	14.48	34.51
CDY45640	Canola	cytosol	14.92	32.9
CDY06999	Canola	cytosol	15.07	32.08
CDX79175	Canola	cytosol	14.18	31.58
CDY68611	Canola	cytosol	12.26	31.32
CDX82963	Canola	cytosol	19.35	31.26
CDY70857	Canola	cytosol	18.91	30.55
CDY72239	Canola	cytosol	13.44	29.26
CDX87871	Canola	cytosol	39.44	29.05
CDY32783	Canola	cytosol	22.3	28.87
CDY47758	Canola	cytosol	22.3	28.44
CDY46535	Canola	cytosol	15.07	26.49
CDY22878	Canola	cytosol	37.22	25.66
CDY53442	Canola	cytosol	14.77	25.32
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	20.38	24.51
CDY47824	Canola	cytosol	12.85	24.37
CDY63700	Canola	cytosol	20.83	24.1
CDX96652	Canola	extracellular	21.12	23.25
CDY48032	Canola	cytosol, extracellular, nucleus	7.68	22.61
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	4.87	22.15
CDY70821	Canola	cytosol	14.62	22.1
CDX82115	Canola	extracellular	7.83	21.2
CDY34134	Canola	cytosol	6.35	20.67
CDY51197	Canola	cytosol	23.34	17.59
CDY51196	Canola	cytosol	23.93	17.42
CDY02564	Canola	cytosol	24.08	17.41
CDY51195	Canola	cytosol, extracellular	24.08	15.32
CDY02563	Canola	cytosol, extracellular	23.78	15.19
CDY47825	Canola	cytosol	16.1	13.75

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	UniProt:A0A078I0M9	unigene:Bna.2394	EnsemblPlants:CDY43099	ProteinID:CDY43099
ProteinID:CDY43099.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00076062001	InterPro:IPR001229
InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PFAM:PF01419	PFscan:PS51752
PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EDF13C	SEG:seg

Description

BnaC05g36780DBnaC05g36780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0M9]

Coordinates

chrLK032545:+:98502..101754

Molecular Weight (calculated)

69106.8 Da

IEP (calculated)

5.682

GRAVY (calculated)

-0.389

Length

677 amino acids

Sequence
(BLAST)

001: MSWDDGKHAK VNKVQITYDD VIYSIQVTYA GTALQSQRRG SDGPKTAEFT LGPDEYITAL TAYGKTLSTQ DVITSLTFKT NKGTYGPYGN KTGYQISAPE
101: GTGKQIAGFL GTSGNVLNSI DVHYAPIPTG TGTGTGGTGT GTGGTETGGT GTGGTGTGGT GTGGTGTGGT GTGGTGTGGT GGTGGTGTGG TGTGGTGTGG
201: TGTGGTGTGT GGTGTGGSGT GSGVEKLDAQ GGTGGTAWDD GSDHDGVAKI TVRTGGAGVQ YVQFGYVKAG QPKQGALGGV QGSRGSTKEI LINHPDEHLI
301: SVEGWYDSSN IIIGIQFKTN QKTSDYMGYD FDGSGTKFTL QVQGKKIIGF HGFASDHLNS IGAYFVPVST STDPSTVPPK KLEAKGGESG AVWDDGAHDN
401: VKKVSVGQGT DGIAAVKFEY RNGSSVVIGA ERGTPTLLGY EEFELASDEY ITIVEGYYDK ILGSDGLTSL TFHTNKGTYG PYGLEGSTHF EFKEDGHKIT
501: GFHGRAGATI SAIGVYLAPV GTIPLTPATQ TKKLEAKGGD GGTTWDDGAF DGIRKVSVGQ TYDGIGAVKF VYNKGSSEII GDEHGKSTLL GFEEFELNYP
601: SEYITEVHGT YDKISASNSA IVNMLTFKTN KPATYGPFGL NAGTPFDLKE EGHKIVGFHG SSGDLLHKFG VHVLPIN

Best Arabidopsis Sequence Match ( AT3G16460.1 )
(BLAST)

001: MSWDDGSHAK VKKVQLTFDE IIYSIQVTYD GATALQSQLR GSVGPKSAEF TLAPDEYITA LSAYGKSLST QEVITALTFT TNKTSYGPYG TKSGFQISAP
101: EATGKQISGF LGTSGNVLNT IDVHYSPIPT GGTGTGGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGGTG TGTGTGTGGT GTGTGTGGTG TGTGTGTGTG
201: TGTGTGTGTG TGGTGTGTGT GGTGTGTGTG TGTGTGTGGT GTGTGTGTGS GAQKLEAQGN STGGTSWDDG SDYDGVTKIY ASYGGEGIQY VKFDYVKGGV
301: TKQGVLHGKQ QSRQNPREFV INHPDEYLVS VEGWYETVML GIQFKTNLNT YEVSIYPFEP STDTKFTLQV QDKKIIGFHG FAGNHVNSIG AYFVPKSSTT
401: PVPSTPLKLT AEGGETGAVW DDGSHDDVKK VYVGQGQDGV AAVKFEYKNG SQVVFGDERG TRTLLGFEEF ELESDEYITS VEGYYEKNFG VDTVVTTLIF
501: KTSKNKTAGP FGIVSGTKFE FKKEGYKITG FHGRAGEYVN AIGAYLAPSG TTPLTPATQS QKLEGAGSEA GTLWDDGAFD GVRKVSVGQA QDGIGAVSFV
601: YDKAGQVVEG KEHGKPTLLG FEEFELDYPS EYITAVDGTY DAIFGNEPIV NMLRFTTNKR VSIPFGIGAG TAFEFKKDGQ KIVGFHGRAG DLLHKFGVHV
701: APITK

Arabidopsis Description

JAL34Jacalin-related lectin 34 [Source:UniProtKB/Swiss-Prot;Acc:O04310]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.